Panicum virgatum (switchgrass): 120672944
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Entry
120672944 CDS
T07260
Name
(RefSeq) transcription factor LG2-like isoform X1
KO
K14431
transcription factor TGA
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
120672944
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120672944
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Basic leucine zipper (bZIP)
Plant bZIP factors
120672944
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Gene cluster
GFIT
Motif
Pfam:
DOG1
bZIP_1
bZIP_2
Tuberin
Motif
Other DBs
NCBI-GeneID:
120672944
NCBI-ProteinID:
XP_039809514
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Position
5N:complement(64566992..64577469)
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AA seq
526 aa
AA seq
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MVHGEESSWRMERAALPLNPAFAYGVQLQHHAAAAPPPSCFLDIQPAAPASAYFGFVELE
EALIHGGGASASTGGCVDPGVITRSDVAAQTKPAAAGYLAGAGAGRPPTLEIFPSWPMRH
QQQLHSGNSQLVGSTTDSSSAQNTMSQMELVSPASPAPGQEVMMVTTDDYSYKPGLAAAA
PPPSFQQHHPPPLQLHGGGDHDKRKQGGSTRKDGKLVDAKTERRLAQNREAARKSRLRKK
AYVQQLETSRIRLQQVEHELQRARSQGLFVGGCSAAGGMGSGAAMFDMEYARWLDDDSKR
LAELRGGLQAHLLDGNLGLIVEECMQHYDELFQLKAALARADVFHLLTGSWATPAERCFF
WMGGFRPSELLKILIPQLDPLTEQQLLGICNLQQSSEQAEEALAQGLHQSLADTVAAGTL
NDGAAAPNYMSLMAVALEKLASLESFYQQADNLRQQTLHQMRRILTTRQAARCFLSIGEY
YRRLRALSNLWASRPRDNFIGAESLSPTATELQVMHQQQQNQFSGF
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggtgcacggcgaggagagctcctggaggatggagcgggcggcgctgcctctcaatccg
gcgttcgcgtacggtgtccaactccaacaccatgccgccgccgccccaccgccttcctgc
ttcctggacatccagcccgcggcgccggcttctgcctacttcgggttcgtggagctggag
gaggcgctcatccatggcggaggcgcctctgccagcaccggcggctgcgtcgacccgggc
gtgatcaccaggagcgacgtcgcggcgcagacaaagccggcagcggcaggatacctcgcg
ggcgctggcgcaggcaggccccccacgctggagatcttcccttcgtggccaatgaggcac
caacagcagctgcacagtgggaattcgcagttagtagggagcaccactgactcgagctca
gctcagaacacaatgtctcagatggagttggtgtccccagcctcccctgcgccgggacag
gaggtcatgatggtgaccactgatgattacagctacaagccgggcctcgccgctgccgcg
cccccgccaagctttcagcagcaccacccgcccccgctgcagctgcacggagggggagac
catgacaagaggaagcaaggaggatccacaaggaaagatggcaagttggtggatgccaag
acggaacggcggctggcgcagaacagagaggctgcgaggaagagcaggctcaggaagaag
gcttacgtgcagcagctggagactagccggatcaggctccagcaggtcgagcatgagctc
cagagagcacggtcacagggcctgttcgttggagggtgcagcgccgcggggggcatgggc
tctggcgccgccatgttcgacatggaatacgcgcggtggctggacgacgacagcaagcgg
ctggcggagctccgcggcgggctgcaggcgcacctgctggacggcaacctgggcctcatc
gtggaggagtgcatgcagcactacgacgagctgttccagctcaaggcggcgctggcgcgc
gccgacgtcttccacctcctcaccggcagctgggccacccccgccgagcgctgcttcttc
tggatgggcggtttccgcccgtcggagctgctcaagatcctgataccgcagctggacccg
ctgacggagcagcagctgctggggatctgcaacctgcagcagtcgtcggagcaggcggag
gaggcgctcgcgcagggcctgcaccagtccctggccgacaccgtcgccgccggcacgctc
aacgacggcgccgccgcccccaactacatgagcctcatggccgtcgcgctggagaagctc
gccagcctcgaaagcttctatcagcaggccgacaatctcaggcagcagacattgcatcag
atgcgccggatcctgaccactcggcaggcggcgcggtgcttcctctccattggggagtac
taccgccgcctcagagctctcagcaatctctgggcttcccgcccccgcgataacttcatc
ggtgcagagagcctcagccccacagcaacggagctgcaggttatgcaccaacagcagcag
aaccagttctcgggattttga
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