Panicum virgatum (switchgrass): 120672988
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Entry
120672988 CDS
T07260
Name
(RefSeq) putative L-cysteine desulfhydrase 1
KO
K22207
L-cysteine desulfhydrase [EC:
4.4.1.28
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00270
Cysteine and methionine metabolism
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
120672988
Enzymes [BR:
pvir01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.28 L-cysteine desulfidase
120672988
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
DUF3410
Motif
Other DBs
NCBI-GeneID:
120672988
NCBI-ProteinID:
XP_039809580
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Position
5N:complement(16547845..16553010)
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AA seq
472 aa
AA seq
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MASDPPPDDAATPPAANGHVRDHDNGHGPSPAKRPRAVISAAEIRAEFAHHDAAVARVNN
GSFGCCPASVLAAQARWQGLFLAQPDAFYFHGLQQGLLRSRAAVAGLVGAGDVSEVSLVD
NATTAAAIILQHAAWSFAEGHFARGDAVLMLHYAYGAVKKSIHAYVARAGATVVEVPLPF
PVASADAIIAEFRAALAVAKEGGRRVRLAVIDHITSMPSVIIPVKELVAICREEGVDKVF
VDAAHSIGQVPVDVRDIGADFYTSNLHKWFFCPPAVAFLHTRKDDPIASQLHHPVVSHEY
GNGLPMESGWIGTRDYSAQLVVSEAIDFVNRFEGGIEGIRSRNHEKVIEMGRMLAEAWGT
FLGSPPELCGSMVMVGLPGCLAVESDDDAMRVRTMLRKDFQVEVPIYYNSRRVEGQEMAK
DKSGDPVTGYVRISHQVYNVREDYERLRDAINKLVSEGFTSCKLRPSEKQEA
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggacccgcccccggacgacgcggctacgcccccggcggcgaacggccacgtc
cgcgaccacgacaacggccacggcccgtccccggcgaagcgcccccgggcggtgatctcg
gcggccgagatccgcgccgagttcgcgcaccacgatgccgccgtcgcgcgcgtcaacaac
ggcagttttggctgctgcccggcctcggtcctcgccgcgcaggcccgctggcagggcctc
ttcctcgcgcagcccgacgccttctacttccacggcctccagcaggggctgctccgctcg
cgcgccgccgtcgccggcctcgtcggcgccggcgacgtctccgaggtctccctcgtcgac
aacgccaccaccgccgccgccatcatcctgcagcacgccgcctggagcttcgccgagggg
cacttcgcccgcggggacgccgtcctcatgctccactacgcctacggcgccgtcaagaag
tccatccacgcctacgtcgcgcgcgcgggggccaccgtcgtcgaggtgcccctgccgttc
cccgtcgcgtccgccgacgcgattattgccgagtttcgggccgcgctcgccgtcgccaag
gaaggggggcggagggtccgcctcgcggtcatcgaccacattacctccatgcccagtgta
atcatcccggtgaaggagcttgttgctatctgccgagaagagggcgtcgacaaggtgttc
gttgacgccgcgcactctataggccaggtccctgtggacgtgcgtgacattggggccgat
ttctacacaagcaaccttcataaatggttcttctgcccccctgccgttgcctttctgcac
acccgcaaggatgatccaatagcctcccagctccaccaccctgttgtctcgcatgagtat
gggaatgggctgcctatggagagtggatggattgggacacgggattacagtgcccagctt
gttgtgtctgaagctatcgattttgtaaatcgatttgagggagggattgaggggatacga
agtcggaaccacgagaaagtgattgagatgggtaggatgcttgctgaggcgtgggggaca
tttcttggctcgccaccagaattgtgtgggagcatggttatggtggggctgccaggttgc
cttgccgttgagagtgatgatgatgcaatgagagtgaggactatgttgaggaaggatttc
caggtggaggtgccaatatactataattcaagaagggtggaagggcaagagatggcaaag
gacaagagtggtgatccagtgacagggtatgtgaggatctcacaccaggtttacaatgtc
agggaggactacgagagactaagagatgctatcaataaacttgtttctgaggggttcacc
agctgcaagttgcggccttcagagaagcaagaagcttag
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