Panicum virgatum (switchgrass): 120673000
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Entry
120673000 CDS
T07260
Name
(RefSeq) CBL-interacting protein kinase 1 isoform X1
KO
K07198
5'-AMP-activated protein kinase, catalytic alpha subunit [EC:
2.7.11.31
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pvir01001
]
120673000
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120673000
03029 Mitochondrial biogenesis [BR:
pvir03029
]
120673000
Enzymes [BR:
pvir01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.31 [hydroxymethylglutaryl-CoA reductase (NADPH)] kinase
120673000
Protein kinases [BR:
pvir01001
]
Serine/threonine kinases: CAMK group
CAMKL family
120673000
Membrane trafficking [BR:
pvir04131
]
Autophagy
Other autophagy associated proteins
Others
120673000
Mitochondrial biogenesis [BR:
pvir03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
120673000
Mitophagy factors
Other mitophagy factors
120673000
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
NAF
Kinase-like
ABC1
Haspin_kinase
KA1
Kdo
APH
Motif
Other DBs
NCBI-GeneID:
120673000
NCBI-ProteinID:
XP_039809604
LinkDB
All DBs
Position
5N:17090449..17095457
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AA seq
463 aa
AA seq
DB search
MVNGEAEAECTRASLLGRYEIGRTLGEGNFGKVKYARHTATGAHFAIKILDRNKILSLRI
DDQIRREIGTLKLLKHPNVVRLHEVAASKTKIYMVLEFVDGGELFDKIAVKRKLSEHEGR
RLFQQLIDGVSYCHDKGVYHRDLKPENVLVDRKGNIKISDFGLSALPQHLGNDGLLHTTC
GSPNYIAPEVLQNRGYDGSLSDIWSCGVILYVMLVGYLPFDDRNLVVLYQKIFKGDCQIP
RWLSPAAQDLLRKILEPNPMKRINIMGIKEHEWFQKDYVPVVPYDDDEDLLPSSVLPIKE
QIDESAQEKPTHINAFQLIGMASSLDLSGFFEEEDVAQRKIRFTSTHSPKDLFDKIENAV
TEMGFKVHRGPRKLKVLKNCKTSKNSRSPASFLVCIEVFELGPALYVVELRKSYGDSILY
RQLCERLSDELGVCKTEEIMRTESLGDSDMSSLDGEALPLSGF
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggtgaacggcgaggcggaggcggagtgcacgcgggcgtcgctgctggggaggtatgag
atcgggcgcacccttggggagggcaacttcggcaaggtgaagtacgcgcgccacaccgcc
accggcgcccacttcgccatcaagatcctcgaccgcaacaagatcctctcgctccgcatc
gatgaccagataaggagggagatcgggacactgaagctgctcaagcacccgaatgtcgtc
cgcttgcacgaggttgctgctagcaaaacgaagatttacatggtgcttgagttcgtcgac
ggcggcgagctctttgacaagattgctgtaaagaggaaactgtctgaacatgagggaagg
aggcttttccagcagctaattgacggcgtcagctattgccatgataaaggtgtctaccac
agggaccttaagccagagaatgttcttgttgatcggaagggaaacatcaagatctccgac
ttcggccttagtgctctacctcaacatctcgggaatgatggacttctgcacacaacatgt
ggcagccccaattacatcgctcctgaggttttgcaaaatagaggttacgatggctccttg
tcggatatatggtcttgtggggtaatcctatatgtaatgcttgttggttaccttcccttc
gatgacaggaatcttgttgttctttatcagaagattttcaagggagactgtcagatccca
aggtggctttcacctgctgcacaggaccttcttagaaagattcttgaaccaaatccgatg
aaaaggatcaacatcatgggcatcaaagagcatgagtggtttcagaaggactatgttcct
gttgttccatacgatgacgacgaagatttacttcctagttcagttctcccaatcaaagag
caaattgatgaatcagctcaagaaaagcctactcatatcaacgcttttcagttgatcgga
atggcttcgtcccttgacctttctggtttcttcgaggaagaggatgtggctcaaagaaag
attcggttcacatcaacgcattcacccaaggatttatttgacaagattgagaatgctgtg
accgagatgggattcaaagtccataggggaccaaggaagctcaaagtattgaaaaattgc
aaaacttccaagaactccaggagtcccgcatcatttttggtgtgcattgaggtgtttgag
ctaggaccggctttgtatgtcgtagaactgaggaaatcctatggagattctatattgtat
agacagctgtgtgagaggctctcagatgagttgggggtgtgcaagacagaggagattatg
aggactgaatcgctgggtgactcagatatgtcgagccttgatggcgaagcactacctttg
tctggtttctga
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