Panicum virgatum (switchgrass): 120673008
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Entry
120673008 CDS
T07260
Name
(RefSeq) ABC transporter G family member 36-like isoform X1
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
120673008
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120673008
Transporters [BR:
pvir02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
120673008
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
ABC_trans_N
AAA_29
Rad17
AAA
RsgA_GTPase
AAA_16
AAA_25
AAA_22
AAA_30
AAA_18
AAA_33
AAA_28
AAA_23
nSTAND3
RuvB_N
NACHT
cobW
T2SSE
SLFN-g3_helicase
AAA_5
Zeta_toxin
NTPase_1
AAA_11
AAA_19
DO-GTPase1
AAA_7
ABC_ATPase
ABC2_membrane_3
Motif
Other DBs
NCBI-GeneID:
120673008
NCBI-ProteinID:
XP_039809612
LinkDB
All DBs
Position
5N:complement(45285675..45292853)
Genome browser
AA seq
1455 aa
AA seq
DB search
MDAAGEIQKVASMRLGNSGSIWRRGDDVFSRSSREEDDEEALRWAALEKLPTYDRVRRAM
VPLGDGAEAGAGGGKGLVNVDVHRLDPQQRRALLERLVRVADEDNERFLLKLRDRVDRVG
IDMPTIEVRFQNLEAEAEVRVGSSGLPTVLNSIVNTIEEAANALHLLPSTKRTMPILHDV
SGIIKPRRMTLLLGPPGSGKTTLLLALAGRLDKDLKQVSGKVTYNGHEMTEFVPERTAAY
ISQHDLHIGEMTVRETLAFAARCQGVGSRFDMLTELSRREKAANIKPDPDIDAFMKASAM
GGKEASVITDYILKILGLEVCADTMVGDEMLRGISGGQRKRVTTGEMLVGPARALFMDEI
STGLDSSTTFQIVNSLRQSIHILGGTAVISLLQPAPETYNLFDDIILLSDGQVVYQGPRE
EVIEFFESMGFRCPERKGVADFLQEVTSKKDQKQYWARHDEPYRFVTVKEFAMAFKSFHT
GRAIEKELAVPFDKSKSHPAALTTTRYGVSGKELLKANIDREILLMKRNSFVYMFRTFQL
MLMSILSMTLFFRTKMKHDTVIDGGLYMGALFFGVLLIMFNGFSEMAMTVFKLPVFFKQR
DLLFFPAWSYTIPSWILKIPITFIEVAGYVFLTYYVIGFDPNIGRFFKQYLILLAVNQMA
AALFRFIGGAARSMVVANVFASFMLLVVMVLGGFILVREKIKKWWIWGYWISPMMYAQNA
ISVNEMLGHSWDKILNSAASNETLGVQTLKSRGVFTGAKWYWIGFGAMIGFTILYNAFFT
LALTYLKPYGDSRPSVSEEELKEKHANVKGEVLDGNHLASASSHQSPGINNETDPAIAED
DSALTKRGMILPFVPLSLTFDNIRYSVDMPQEMKAQGVQEDRLELLKGVSGSFRPGVLTA
LMGVSGAGKTTLMDVLAGRKTGGYIEGDISISGYPKKQETFARVSGYCEQNDIHSPQVTV
YESLLFSAWLRLPKDVDSNKRKIFVEEVMELVELKPLRDALVGLPGVNGLSTEQRKRLTI
AVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDEL
FLMKRGGEEIYAGPLGHHSSELIKYFEGIQGVSKIKDGYNPATWMLEVTAVSQEQILGVD
FSQMYKKSELFQRNKALIKELSQPAPGSSDLHFPSKYAQSSITQCMACLWKQNLSYWRNP
PYNTVRFFFTTIIALLLGTIFWDLGSKVKTSQDLLNAMGSMYSAVLFIGVMNCTSVQPVV
AVERTVFYRERAAGMYSAFPYAFGQVVIELPYALVQDILYGVIVYSMIGFEWTVAKFFWY
LFFGYFTLLYFTFYGMMAVGMTPNYHIASIVSSAFYSMWNLFSGFIIPRPRVPIWWRWFC
WICPVAWTLYGLVVSQFGDMMTTMEDGRTVKVFVEDYFDFKHSWLGWVATVVVGFAVLFA
ALFGLAIMKLNFQKR
NT seq
4368 nt
NT seq
+upstream
nt +downstream
nt
atggacgcggcgggggaaatccagaaggtggcgagcatgcggctggggaacagcggctcc
atatggcggcgcggggacgacgtgttctcgcgctcgtccagggaggaggacgacgaggag
gcgctgcggtgggccgcgctcgagaagctgcccacctacgaccgcgtccgccgcgccatg
gtcccgctcggcgacggcgccgaggcgggcgcgggcggcgggaaggggctcgtcaacgtc
gacgtgcacagactcgacccgcagcagcgccgtgcgctgctggagcgcctcgtgcgcgtc
gccgacgaggacaacgagcgcttcctgctcaagctcagggaccgcgtcgacagggtcggg
atcgacatgcccacgatcgaggtgcggttccagaacctcgaggcggaggccgaggtgcgc
gtcggcagcagcggcctccccaccgtcctcaactccatcgtcaacacgatcgaggaagcg
gcgaacgcgctgcacttactgcccagtacgaagcggaccatgcccatcctccacgatgtc
agcggaatcatcaagcctcgcaggatgacccttctgttaggcccacccggatcagggaag
accactttgctgctcgcgttggctggaaggcttgacaaagacctcaagcaggttagtggc
aaggtgacctacaatgggcacgagatgacagagtttgttccagagaggacggccgcgtac
atcagccagcatgacctccacatcggggagatgactgtgagggagactcttgcattcgca
gcacgttgccagggtgttggctcccgctttgatatgctgactgagctgtcaagacgggag
aaggcggccaatatcaaacctgatcctgatattgatgcattcatgaaggcatctgcaatg
ggtgggaaagaggccagtgtgatcactgactatatcctgaagatattagggctagaggta
tgcgcggacactatggtaggggatgaaatgctcaggggcatatctggtggacagcgaaag
cgtgtgacaaccggtgagatgctggttggtcctgccagggcgctttttatggacgagatc
tcgactgggcttgatagctccactaccttccagattgtgaactcactcaggcagtccatc
cacatccttggtggcacagcagtcatctccttgcttcaaccagcgcctgagacatacaac
ctgttcgatgacattattctcctctcagacggccaggttgtgtaccagggccctcgagaa
gaagttatcgagttttttgagtccatgggtttcagatgccctgagaggaagggtgttgct
gacttcttgcaagaagtgacttcgaagaaagatcagaaacagtactgggcacggcatgat
gagccctacaggtttgtgacggtgaaggaattcgcaatggcattcaagtcattccacaca
gggagagctatagaaaaagagcttgctgtcccatttgacaagagcaaaagccacccagcc
gcgctaaccaccacgagatatggcgtgagtggcaaggagctgctgaaggcaaacatagac
cgtgagatccttctcatgaagaggaactctttcgtctacatgttcagaaccttccagctg
atgctgatgtcaatactttcaatgactctcttcttccgtacgaagatgaagcatgacaca
gtgattgatgggggcctctacatgggcgcactcttctttggcgtgcttttgatcatgttc
aatggcttctctgagatggcaatgactgtcttcaaactgcctgtattcttcaagcagagg
gatctccttttctttccagcatggtcctacactataccctcatggatcctcaagataccc
atcacatttatcgaggtcgcaggttatgtattcttgacatactatgtcattggcttcgac
ccaaatatcggcaggttcttcaagcagtatctgattctgttagcagtcaatcagatggca
gcggcactctttcgctttattggtggggcagcgaggagcatggttgttgctaatgtcttt
gcatcattcatgttgctggttgtcatggtgttgggaggatttattctagtaagagaaaaa
ataaagaaatggtggatctgggggtactggatctccccaatgatgtatgcgcagaatgcc
atttcggtgaatgagatgttggggcacagctgggacaaaatattgaacagcgctgcctcc
aacgagaccctaggtgtgcaaacccttaagtcccgtggagtattcacaggagcgaagtgg
tactggattggctttggtgcaatgattgggttcaccatactctataatgctttcttcact
cttgcccttacatacctcaaaccatatggcgactctcggccatcagtatctgaagaggag
ctgaaggagaagcatgccaacgtaaaaggcgaggttctggatggcaatcacctggcatca
gcaagcagtcatcaatcaccaggaatcaacaatgaaactgatccagcaatcgcggaagat
gattctgccctgactaaacggggaatgatactcccatttgtcccactttcactcaccttt
gataacatcagatactctgttgacatgccacaggaaatgaaagcacaaggtgtacaagaa
gatcgtctggagctcctcaaaggtgtcagtgggtcttttaggcctggtgtgctgaccgca
ctaatgggcgtcagtggcgcaggaaaaactactttgatggatgttttagccggaagaaag
acaggtggatacattgaaggagacatcagcatttcaggatacccgaagaaacaagagacc
ttcgcacgagtatcaggatactgtgaacaaaatgatatccactcaccgcaggtgacagtc
tatgagtcactgcttttctcagcatggctccggcttcccaaggatgttgattcaaacaaa
agaaagatcttcgttgaagaggtgatggagcttgtggagctcaaaccgttaagggatgct
ttggttggacttcctggagtgaatggtctgtcaactgagcagaggaaaaggcttaccatt
gctgtggaacttgttgcaaatccatcaatcatcttcatggatgagccaacctcggggctt
gatgcccgggcagctgcaattgtgatgcggacggtgaggaatactgtcgatactggtagg
actgtggtctgcacgatacatcagcctagcattgacatatttgaagcatttgatgagctt
ttcctgatgaagcgtggtggagaagagatctatgctggtccacttggccatcattcttca
gagcttatcaagtatttcgaggggattcaaggggtcagcaaaattaaagatggctacaat
ccggcaacatggatgctggaagtgactgcagtctctcaggaacagattctaggtgttgat
ttcagtcagatgtacaagaaatctgaactcttccagaggaacaaggccttgataaaggaa
ctaagccaaccagcgccaggttcaagtgacctgcatttccctagcaaatacgcgcagtct
tccatcacacaatgcatggcttgcctatggaagcagaacctgtcatactggaggaaccct
ccttacaataccgttaggttctttttcactaccatcattgctctcctcctcggaaccatc
ttttgggatcttggcagcaaagtgaaaacgtcacaagacttgttaaacgccatgggatca
atgtactctgcggtgctgttcatcggtgtcatgaactgtacctcagttcagccagtggtg
gctgtggagcggactgtcttttaccgtgaaagagctgcgggcatgtactcagctttccca
tatgcatttggacaggttgtcatcgagctcccatacgcactggttcaggatatcctatac
ggtgtcatagtgtactctatgatcggcttcgagtggacggttgccaagttcttctggtac
ctcttctttgggtacttcacactgctctacttcacattctacggcatgatggccgttggc
atgacaccaaactaccatatcgcctcgatcgtgtcctcagcattctattctatgtggaac
ctcttctccgggttcatcatcccgcgacccagagtgccgatttggtggaggtggttctgc
tggatatgccctgtggcgtggacgctgtatggtctggttgtgtcccagttcggtgacatg
atgacaacgatggaggatggcaggactgtgaaggtgttcgtcgaggactacttcgacttc
aagcacagctggctggggtgggtggccactgtggtcgtggggttcgcagttctctttgct
gcgctgttcggccttgccatcatgaagctcaacttccagaagagatga
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integrated database retrieval system
