Panicum virgatum (switchgrass): 120673009
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Entry
120673009 CDS
T07260
Name
(RefSeq) ABC transporter G family member 36-like
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
120673009
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120673009
Transporters [BR:
pvir02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
120673009
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
ABC_trans_N
AAA_29
AAA_16
AAA_25
Rad17
AAA
AAA_22
RsgA_GTPase
AAA_30
AAA_18
AAA_33
AAA_28
AAA_23
nSTAND3
NACHT
cobW
AAA_17
NTPase_1
Zeta_toxin
AAA_5
RuvB_N
T2SSE
AAA_11
AAA_19
DO-GTPase1
SLFN-g3_helicase
AAA_7
ABC_ATPase
ABC2_membrane_3
Motif
Other DBs
NCBI-GeneID:
120673009
NCBI-ProteinID:
XP_039809614
LinkDB
All DBs
Position
5N:complement(45225805..45233433)
Genome browser
AA seq
1454 aa
AA seq
DB search
MDAAGDIVKVASMRRGNSGSMWRRGEDVFSRSSREEDDEEALRWAALEKLPTYDRVRRAM
VPLGDGAEAGAGGGKGLVDVDVLSLGPQQRRALLERLVRVADEDNERFLLKLKDRVDRVG
IDMPTIEVRFQNLEAEAEVRVGSSGLPTVLNSIVNTVEEAANALHLLPSRKRTMPILHDV
SGIIKPRRMTLLLGPPGSGKTTLLLALAGRLDKDLKVSGKVTYNGQEMTEFVPERTAAYI
SQHDLHIGEMTVRETLAFSARCQGVGSRFDMLTELSRREKAANIKPDADIDAYMKASAMG
GQEASVVTDYILKILGLEICADTMVGDEMLRGISGGQRKRVTTGEMLVGPARALFMDEIS
TGLDSSTTFQIVNSLRQSIHILGGTAVISLLQPAPETYNLFDDIILLSDGQVVYQGPREE
VIEFFESMGFRCPERKGVADFLQEVTSKKDQKQYWARRDEPYRFVTVKEFAMAFKSFHTG
RAIENELSVPFDKSKSHPAALTTTRYGVSGKELLKANIDREILLMKRNSFVYMFRTFQLM
LMSIIAMTLFFRTKMKHDTVIDGGLYMGALFFGVLLIMFNGFSEMAMTVFKLPVFFKQRD
LLFFPAWSYTIPSWILKIPITFIEVAGYVFLTYYVIGFDPNVGRFFKQYLLLLAINQMAA
ALFRFIGGVARNMIVANVFASFMLLVVMVLGGFILVREKIKKWWIWGYWISPMMYAQNAI
SVNEMLGHSWDKILNSTASNETLGVQILKSRGIFPEAKWYWIGFGAMIGFTILFNALFTL
ALTYLKPYGNSRPSVSEEELKEKHANMKGEVLDGNHLASASSHRSTGMNIETDPAIVEDD
SALTKRGMILPFVPLSLTFDNIRYSVDMPQEMKAQGVQEDRLELLKGVSGSFRPGVLTAL
MGVSGAGKTTLMDVLAGRKTGGYIEGDISISGYPKKQETFARVSGYCEQNDIHSPQVTVY
ESLLFSAWLRLPKDVDSKKRKIFIEEVMELVELKPLRDALVGLPGVNGLSTEQRKRLTIA
VELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELF
LMKRGGEEIYAGPLGHHSSELIKYFEGIQGVSKIKDGYNPATWMLEVTTASQEQILGVDF
SEMYKKSELFQRNKALIKELSQPAPGSSDLHFPSKYAQSSITQCMACLWKQNLSYWRNPP
YNTVRFFFTTIIALLLGTIFWDLGGKVETSQDLLNAMGSMYSAVLFIGVMNCTSVQPVVA
VERTVFYRERAAGMYSAFPYAFGQVVIELPYALAQDILYGVIVYSMIGFEWTVAKFFWYL
FFGYFTLLYFTFYGMMAVGMTPNYHIASIVSSAFYAIWNLFSGFIIPRPKVPIWWRWYCW
ICPVAWTLYGLVVSQFGDVLTRMDDDRTVKMFVEDYFDFKHSWLGWVAAVVVGFAVLFGA
LFGFAIMKLNFQKR
NT seq
4365 nt
NT seq
+upstream
nt +downstream
nt
atggacgcggcgggggacatcgtgaaggtggcgagcatgcggcgggggaacagcggctcc
atgtggcgccgcggggaggacgtgttctcgcgctcgtccagggaggaggatgacgaggag
gcgctgcggtgggccgcgctcgagaagctgcccacctacgaccgcgtccgccgcgccatg
gtcccgctcggcgacggcgccgaggcgggcgcgggcggcgggaaggggctcgtcgacgtc
gacgtgctcagcctcggcccgcagcagcgccgtgcgctgctggagcgcctcgtgcgcgtc
gctgacgaggacaacgagcgcttcctgctcaagctcaaggaccgcgtcgacagggtcggg
atcgacatgcccacgatcgaggtgcggttccagaacctcgaggcggaggcggaggtgcgc
gtcggcagcagcggcctccccaccgtcctcaactccatcgtcaacacggtcgaggaagcg
gcgaacgcgctgcacttactgcccagtaggaagcggaccatgcccatcctccacgacgtc
agcggaatcatcaagcctcgcaggatgacccttctgttaggcccacccggatcagggaag
accactttgctgctcgcgttggctggaaggcttgacaaagacctcaaggttagtggaaaa
gtgacctacaatgggcaagagatgacagagtttgttccagagaggacagctgcgtatatc
agccagcatgacctccacatcggggagatgactgtgagggagactcttgcattctcagca
cgctgccagggtgttggctcccgctttgatatgctgactgagctgtcgaggcgggagaag
gcggccaatatcaaacctgatgctgatattgatgcatacatgaaggcttctgcaatgggt
gggcaagaggccagtgtggtcactgactacatcctgaagatattaggactagagatatgt
gcggacacgatggtaggggatgaaatgctcaggggcatatctggtggacaacggaagcgt
gtgacaaccggtgagatgctggttggtcctgccagggcgctttttatggacgagatctcg
actgggcttgatagctccactaccttccagattgtgaactcactcaggcagtccatccac
atccttggtggcacagcagtcatctccttgcttcaaccagcgcctgagacatataacctg
ttcgatgacattattctcctttcagacggccaggttgtgtaccagggccctcgagaagaa
gttatcgagttttttgagtccatgggtttcagatgccctgagaggaagggtgttgctgac
ttcttgcaagaagtgacttcgaaaaaagatcagaaacagtactgggcacggcgtgatgag
ccctacaggtttgtgacggtgaaggaattcgcaatggcattcaagtcattccatacgggg
agagctatagaaaatgagctttctgtcccattcgacaagagcaaaagccacccagccgca
ttaaccaccacgagatatggtgtgagtggcaaggagctgctgaaggcaaacatagaccgt
gagatccttctgatgaagaggaactctttcgtctacatgttcagaacctttcagctgatg
ctgatgtcaatcattgcaatgactctcttcttccgtacgaagatgaagcatgacacagtg
attgatgggggcctctacatgggcgcactcttctttggcgtgcttttgatcatgttcaat
ggcttctctgagatggcaatgactgtcttcaaactgcctgtattcttcaagcagagggat
ctccttttctttccagcatggtcctacactataccctcatggatcctcaagatacccatc
acatttatcgaggtcgcaggttatgtattcttgacatactatgtcattggcttcgaccca
aatgtcggcaggttcttcaagcagtatctgcttctgttagccatcaatcagatggcagcg
gcactctttcgctttattggtggggtagcgaggaacatgattgttgctaatgtctttgca
tcattcatgttgctggttgtcatggtgttgggaggatttattctagtaagagaaaaaata
aagaaatggtggatctgggggtactggatctccccaatgatgtatgcgcagaatgccatt
tcggtgaatgagatgttggggcacagctgggacaaaatattgaatagcactgcctccaac
gagaccctaggtgtgcaaatcctcaagtcccgtggaatattcccagaagcaaagtggtac
tggattggctttggtgcaatgattgggttcaccatactcttcaatgctctcttcactctt
gcccttacatacctcaaaccatatggcaattctcggccatcagtatctgaagaggagctg
aaagagaagcatgccaacatgaaaggcgaggttctggatggcaatcacctggcatcagca
agtagtcatcgatcaacaggaatgaacatcgaaactgatccggcaatcgtggaagatgat
tctgccctgactaaacggggaatgatactcccatttgtcccgctttcactcacctttgat
aacatcagatactctgttgacatgccacaggaaatgaaagcacaaggtgtacaagaagat
cgtctggagctcctcaaaggtgtcagtgggtcatttaggcctggtgtgctgaccgcacta
atgggcgtcagtggcgcaggaaaaactactttgatggatgtgttggccggaagaaagaca
ggtggatacattgaaggagacatcagcatttcaggatacccgaagaaacaagagaccttc
gcacgcgtatcaggatactgtgaacaaaatgatatccactcaccgcaggtgacagtctat
gagtcactgcttttctcagcatggctccggcttcccaaggatgttgattcaaaaaaaaga
aagatcttcattgaagaggtgatggagcttgtggagctcaaaccactgagggatgctttg
gttggactccctggagtgaatggtctgtcaactgagcagaggaaaaggcttaccattgct
gtggaacttgttgcaaatccatcaatcatcttcatggatgagccaacctcggggcttgat
gcccgggcagctgcaattgtgatgcggacagtgaggaacactgtcgatactggtaggact
gtggtctgcacgatacatcagcctagtattgacatatttgaagcattcgatgagcttttc
ctgatgaagcgaggtggagaagagatctatgctggtccacttggccatcattcttcagag
cttatcaagtatttcgaggggattcaaggggtgagcaaaattaaagatggctacaatccg
gcaacatggatgctggaagtgactacagcctctcaggaacagatcctaggtgttgatttc
agtgagatgtacaagaaatctgaactcttccagaggaacaaggccttgataaaggaacta
agccaaccagcgccaggttcaagtgacctgcatttccctagcaaatacgcgcagtcttcc
atcacacaatgcatggcttgcctgtggaagcagaacctgtcatactggaggaaccctcct
tacaataccgttaggttctttttcaccaccatcatagctctcctcctcggcaccatcttt
tgggaccttggcggcaaagtggaaacgtcacaagacttgttaaacgccatgggatcaatg
tactctgctgtgctgttcatcggtgtcatgaactgtacctcagttcagccagtggtggct
gtggagcggactgtcttttaccgtgaaagagctgcgggcatgtactcagctttcccatat
gcatttggacaggttgtcatcgagctcccatacgcactggctcaggatatcctatacggt
gtcatagtgtactctatgatcggcttcgagtggacggttgccaagttcttctggtacctc
ttctttgggtacttcacactgctctacttcacattctacggcatgatggccgttggcatg
acaccaaactaccatatcgcctcgatcgtgtcctcagcattctatgctatctggaacctc
ttctccgggttcatcatcccacgaccaaaagtgccgatttggtggaggtggtactgctgg
atatgccccgtggcgtggacactgtatgggctggttgtgtctcagttcggtgacgtgttg
acacggatggacgatgacaggactgtcaagatgttcgttgaggactacttcgacttcaag
cacagctggctggggtgggtggccgctgttgtcgtggggttcgcagttctctttggtgcg
ctgttcggctttgccatcatgaagctgaacttccagaagagatga
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integrated database retrieval system
