Panicum virgatum (switchgrass): 120673010
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Entry
120673010 CDS
T07260
Name
(RefSeq) ABC transporter G family member 37 isoform X1
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
120673010
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120673010
Transporters [BR:
pvir02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
120673010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
AAA_16
ABC_trans_N
AAA_29
AAA
AAA_22
RsgA_GTPase
AAA_30
AAA_25
AAA_33
AAA_28
nSTAND3
Zeta_toxin
cobW
NTPase_1
AAA_11
RuvB_N
AAA_5
AAA_19
T2SSE
Motif
Other DBs
NCBI-GeneID:
120673010
NCBI-ProteinID:
XP_039809615
LinkDB
All DBs
Position
5N:complement(45334312..45342512)
Genome browser
AA seq
1445 aa
AA seq
DB search
MDREIHRVTSLQRDSSLWRRGDDVFSRQSSRFQDEEDDEEALRWAALERLPTFDRVRRGM
LALDGDGEKVEVDVGRLGARASRALIERLVRAADDDHERFLLKLKERMDRVGIDYPTIEV
RYEHLEVEAQVHVGNRGLPTLINSVTNTIESIGNALHIFPSRKQPMTVLHDVSGIVKPRR
MTLLLGPPGSGKTSLLLALAGKLDKDLKVSGKVTYNGHGMNEFVPERTAAYISQHDLHIG
EMTVRETLQFSARCQGVGTRYEMLTELARREKAANIKPDHDIDVYMKASAMGGQESSIVT
DYILKILGLEVCADTVVGNEMLRGISGGQRKRVTTGEMLVGPARALFMDEISTGLDSSTT
YQIVNSLRQTIHILGGTAVISLLQPAPETYNLFDDIILLSDGHVVYQGPREHVLEFFEFM
GFRCPARKGVADFLQEVTSRKDQGQYWYRQDRPYRFVPVKKFADAFNTFHVGRSIQNELS
EPFDRTRSHPAALATSKYGVKRMELLKATIDRELLLMKRNAFMYIFKSVNLTLMSLVVMT
TFFRTNMHRNLTYGGIYMGALYFALDTVMFNGFAELAMTVLKLPVFFKQRDLLFFPAWAY
TIPSWILQIPITFFEVGVYVFSTYYVIGFDPSVSRFFKQYLLLLALNQMSSALFRFIAGI
GRDMVVSHTFGPLALLAFQTLGGYVLARPNVKKWWIWGYWISPLSYAQNAISTNEFLGKS
WSQIQNGTTLGVTVLKNRGIFTEAKWYWIGFGALIGYTLLFNLLYTLALSVLSPFTDSHG
SMSEEELKEKHATLTGEVIEGQKEKKSRRQEVELSNSVGPNSVTTSDNSSQNRKGMVLPF
APLSLTFNDIRYSVDMPEAMKAQGVTEDRLLLLKGVSGSFRPGVLTALMGVSGAGKTTLM
DVLAGRKTGGYIEGDITISGYPKKQETFARISGYCEQNDIHSPHVTVYESLLFSAWLRLP
SDIDLETRKMFIEEVMDLVELTSLRGALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFM
DEPTSGLDARAAAIVMRTVRNTVNTGRTVVCTIHQPSIDIFEAFDELFLMKRGGEEIYVG
PVGQNSSKLIEYFERIEGVSKIKDGYNPATWMLEVSSSAQEEMLGVDFCEIYKQSELYQR
NKELIEELSTPPPGFSDLNFPTQYSRSLFTQCLACLWKQKLSYWRNPSYTAVRIMFTVII
ALLFGTMFWDLGGRTKKQQDLFNAMGSMYAAVLYLGVQNSGSVQPVVVVERTVFYRERAA
GMYSALPYAFGQVLIELPYIFVQTLIYGVLVYSMIGFEWTAAKFLWYLFFMYFTLLYFTF
YGMMAVGLTPNESIAAIISSAFYNVWNLFSGFLIPRPKIPVWWRWYSWICPVAWTLYGLV
ASQFGDLTHMLEDSDKPQTVAQFITEYYGFHHDLLWLVALVHVALACFFAFLFSFAIMKF
NFQKR
NT seq
4338 nt
NT seq
+upstream
nt +downstream
nt
atggatcgggagatccaccgggtgacgagcctgcagcgggacagctcgctgtggcggcgc
ggggacgacgtgttctcgcggcagtcgtcgcggttccaggacgaggaggacgacgaggag
gcgctgcggtgggcggcgctggagcggctgccgacgttcgaccgggtgcggcggggcatg
ctggcgctggacggggacggcgagaaggtggaggtggacgtggggcggctgggcgcgcgc
gcgtcccgcgccctcatcgagcgcctcgtccgcgccgccgacgacgaccacgagcgcttc
ctgctcaagctcaaggagcgcatggaccgcgtcggcatcgactaccccaccatcgaggtc
cgctacgagcacctcgaggtcgaggcgcaggtgcacgtcggcaaccgcggcctccccacg
ctcatcaactccgtcaccaacaccatcgagtccatcgggaacgcgctacacatcttcccc
agcaggaagcaaccgatgaccgtcctccacgacgtcagcgggatcgtcaagccccggagg
atgactctgctgctggggcctccagggtcgggaaagaccagcctgctcctggcgctggcc
gggaagctcgacaaggacctcaaggtctcggggaaggtcacctacaacgggcacgggatg
aacgagtttgtccccgagaggaccgcggcgtacatcagccagcacgacctccacatcggg
gagatgaccgtgagggagaccttgcaattctcggcgcggtgccaaggtgttggcactaga
tacgaaatgctcactgagttggccagaagggaaaaggcagcgaacatcaagccagaccat
gatattgatgtctatatgaaggcttcagcaatgggtgggcaagaatcaagtattgttacg
gactacatactgaagatattaggattggaggtctgtgcggacacagtggtaggaaatgag
atgttgaggggtatttctggtggtcaacggaagcgtgtcacaacaggtgaaatgcttgtt
ggtccggcaagagctctgttcatggatgagatatccactggactggacagctcaaccaca
taccagattgtgaattcccttaggcagactatccacatccttggcggaactgcagtcatt
tccttgctccagccagcgcctgaaacatacaacttgtttgatgacattatactcctctct
gatgggcacgttgtgtaccagggcccccgtgaacatgtgctcgagttctttgagttcatg
ggcttcagatgccctgccagaaagggtgtggctgacttcttgcaggaggtgacatcaagg
aaagaccaggggcagtattggtataggcaggacaggccataccgttttgtgcctgtgaag
aaatttgcagatgcattcaatacattccacgtgggccgttccatacaaaatgaactttca
gagccgtttgataggactcggagccaccctgctgcgctagctacttcaaagtatggtgtc
aagaggatggagttgctgaaagccactattgatagggagcttctactcatgaagaggaat
gcatttatgtacatttttaaatctgttaacctaactcttatgtcacttgttgtgatgact
acatttttccgtaccaatatgcaccgtaatttgacttatggaggcatctacatgggagct
ctctactttgctcttgacactgtcatgttcaatggttttgcggagcttgccatgactgtc
ctgaaactgcctgtattcttcaagcagagggatcttcttttcttccctgcatgggcctac
accataccatcgtggattcttcagatccctatcacattttttgaagttggagtttatgtt
ttctccacatactatgttattggatttgatcccagtgtgagcaggttctttaagcagtat
ctgctgctccttgcactcaatcagatgtcatctgcacttttccgtttcattgctggaatt
ggaagagacatggttgtgtctcacacctttgggcccttagcactgttggctttccaaaca
ctgggtggctatgtccttgcaagacctaatgtgaagaaatggtggatttggggttactgg
atctctcctctatcgtatgcacagaatgctatttcaacaaatgaatttctgggtaaaagt
tggagccaaattcaaaatggaacaaccttgggggttactgttctcaagaaccgtggcatc
tttactgaagctaagtggtactggataggctttggtgccttgattggatacacactcctc
ttcaacctgctctacactctagctctttcagttttgagtccattcactgactctcatgga
tcaatgtctgaagaggaattgaaagaaaagcatgccaccttaactggtgaagttatagag
ggacaaaaggaaaagaaatctaggaggcaggaagtggagttgtccaacagtgttggtcca
aactctgtgactaccagtgacaattctagccaaaacaggaaggggatggtcctcccattt
gcaccactgtctctgacctttaatgacattagatactcagtggacatgccagaggcaatg
aaagcacaaggagtaacagaagaccgcctgctgcttttgaagggtgttagtggttctttt
aggccaggagtccttactgcattgatgggtgttagtggagccggaaagaccactctgatg
gatgtattagcaggtagaaaaactggaggctatattgagggagatatcaccatctcaggc
tatccaaagaagcaagagacctttgcacggatatcaggatactgtgagcaaaatgatatt
cattctccacatgtaacagtatacgagtccctactattttctgcatggctgcgccttcct
tcagatatcgatttagaaacacgaaagatgttcatcgaggaggttatggatcttgtagag
ctcacatcattgaggggtgcacttgttgggcttcctggagtgagtggcctgtcaactgag
caacgcaagaggctaactattgctgtggagcttgttgccaatccatcgatcatttttatg
gatgagccaacctccggtcttgatgctcgtgcagctgcaattgtgatgaggactgtaagg
aacactgtgaacaccggcaggactgttgtttgcaccatccaccagccaagcattgacata
tttgaagcatttgatgagcttttcctaatgaagagaggaggtgaagagatatatgttggt
ccagtgggacagaactcctcaaaactgattgagtactttgagagaattgaaggtgttagt
aagataaaggacggatataacccagcaacctggatgttggaagtgtcgtctagtgcccag
gaggagatgctcggggttgatttctgtgaaatctataagcaatcagaattatatcaaagg
aacaaggaactcatagaggagctgagcacaccacctcctggctttagtgatctcaatttc
cctacgcagtactcaagatcgttgtttactcaatgcctagcttgcctgtggaagcagaag
ttgtcatactggaggaatccatcatacacggcagttagaataatgttcaccgtcatcatt
gcactcttgtttggaaccatgttctgggaccttgggggaagaactaaaaaacaacaggat
ctgttcaatgccatgggatcaatgtatgctgcagttctgtatcttggagtgcagaactct
ggttctgttcaaccagtggtggtggtggaacgaacagtcttctatcgagaaagagcggct
ggcatgtattcagctttgccatatgcatttggacaggttctgattgaattgccatacatc
tttgtccagactctgatatacggtgtgctggtctattccatgattggatttgagtggact
gctgccaagttcctctggtacctgttcttcatgtacttcacgctgctctacttcacgttc
tatggtatgatggcagttggcttgactccgaatgaaagcatagcggctatcatctcatca
gcgttctacaacgtgtggaacctcttctcaggatttttgatccctcgacctaaaattcct
gtatggtggaggtggtacagctggatctgcccggttgcatggacactgtacggattggtt
gcctcccagtttggtgacctcacgcatatgcttgaagactcagataaaccacagaccgtg
gcacaattcatcacagaatactatggcttccatcacgacctcctgtggctcgtcgcgttg
gtgcacgttgccctggcctgtttcttcgcgttcctgttcagtttcgccatcatgaagttc
aacttccagaagagatga
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