Panicum virgatum (switchgrass): 120673012
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Entry
120673012 CDS
T07260
Name
(RefSeq) ubiquitin-like modifier-activating enzyme atg7
KO
K08337
ubiquitin-like modifier-activating enzyme ATG7
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
120673012
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120673012
04121 Ubiquitin system [BR:
pvir04121
]
120673012
03029 Mitochondrial biogenesis [BR:
pvir03029
]
120673012
Membrane trafficking [BR:
pvir04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
120673012
Atg8 conjugation proteins
120673012
Ubiquitin system [BR:
pvir04121
]
Ubiquitin-activating enzymes (E1)
UBL-activating enzymes
120673012
Mitochondrial biogenesis [BR:
pvir03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
120673012
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG7_N
ThiF
Shikimate_DH
Pyr_redox_2
Pyr_redox
ELFV_dehydrog
2-Hacid_dh_C
Motif
Other DBs
NCBI-GeneID:
120673012
NCBI-ProteinID:
XP_039809621
LinkDB
All DBs
Position
5N:complement(45730383..45737221)
Genome browser
AA seq
1018 aa
AA seq
DB search
MAGAGAAGFPRLLQVQALQSLADEGFWDALRRLKLDVLGTDDSPIPITGYYTPRQFRPMA
SFFNLRPGSLNNSPGDRNGCPVPGTLINTNNMRGFQDLDRELLLKAEAKKILHDIMSGDV
EENPALLLRFLVTSFADLKNWKVYYNVAFPSLVFNSRMALLSLHCASEVLSKEEAASLYE
ALQEWRASSETTVVPFFLVGISSDSSASVRPLKDWKTCQGNYQKLLFGFYDHGCLSNCPG
WAIRNYITFLTFRRKIEKVQFFCYREYRGNPDLDQSLIGESSFPSPHGWDDPDHVPDAIG
WEGLKPGKGTKEMKPKEIDLRSMNPASQDEEKQLMHLKLMGWRHFPVNIDKLSQVRVLVL
GAGTLGCEVARLLMTWGVRKLTVVDSGSVAMSDLVKQSLYIDKDVGVPRVTAIVPHLKAR
CPAAEVEGIQMQIPVPGHLDSASKMASVLDDCKHLQTLVAANDAVFLLTDTWESRWLPTL
LCASENKIAITAVLGCDSYVVMRHGAGPGTSGGTDELTAQIENLSTEDAFGNERLGCCFC
NDAVSLFNPIPNGTLPGLTSVASGKAVELFARMLHHPDEIHAPGDIAGMETEHQLGLLPH
QLRGSLPKCDLSLELGNSSGNCTACSIAVLSEYRRRGLDFVMQAINYPTYLKDLTGISDS
KRPDTCPKMLASISVNSDKISDVRCLLLGAGTLGCDVARILMDCGVRKLTVVDSGRVVVS
NLARQSLYTSDDRGAPKATAILKHLVERCPSVDAQGIQMEIPMPGHPVSPGEAAGVLQDC
KRLKELVASHDAIFLLTDTRESRWLPTLLCTDENKIAITAALGYDSYLVMRHGAGPGKSC
EASNVTAAMDKLSTKDSLGRQRLGCYFCNDVVAPVDSVSNRTLDQQCTVTRPGLASIASG
CAADLFTRMLHHPDGIHAPGEIAGASSGHPLGLLPHQMRGSLSQYNLLTLMGYSSSNCTA
CSNVVLSEYRRRGMDFVMQVINEPTYLEDLTGLTYLMKSAACSQVEWVETDEDNFVEI
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtgccggtgcggcggggttcccgcggctgctgcaggttcaggccctccagagc
ttagcggatgaggggttctgggacgcgctccgccgcctcaagctcgacgtcctcggcacc
gacgactcccccatcccaatcaccggttattatactccacgccagtttcgcccgatggcg
agcttcttcaacttacgtccgggatcgttgaacaattcgcctggtgataggaacggttgt
ccagtcccagggaccctcataaacactaataacatgaggggattccaagacctagatagg
gaacttcttctgaaagcggaagcaaagaagatcttgcatgacattatgtctggtgatgta
gaagagaatcctgctctgctacttaggttccttgtgacatcatttgccgatctgaagaat
tggaaggtctattacaatgttgcattcccctcgttggttttcaactctagaatggccctg
ctaagtctgcactgcgcctcagaagtgctcagcaaagaagaggcagcatccttgtatgaa
gcattgcaagagtggcgtgcttctagtgaaacaacagttgtaccattctttctggttggt
atatcgtcggattcctctgcctctgtaagaccacttaaggactggaaaacttgccagggg
aactatcaaaagctactgtttggattttatgatcatggatgtctctcaaattgccctggc
tgggctattagaaactacattacattcctgactttccggcggaagattgagaaagttcag
ttcttctgctaccgtgaatatcgaggaaaccccgatctagatcaatccctcattggcgaa
tcatcatttccatcacctcatgggtgggatgaccctgatcatgtacctgatgctattggg
tgggaaggattaaagccaggaaagggaacaaaagaaatgaagccaaaggaaatagatctt
cgatcaatgaatccagcaagtcaggatgaagaaaaacagctgatgcacttaaagcttatg
gggtggcgccactttcctgtgaatatagacaagttatctcaggttcgagttcttgtcttg
ggcgctggaactcttggatgtgaagttgctcgcctacttatgacctggggtgtacggaaa
ttaactgtggttgacagtggtagtgttgccatgtctgaccttgtcaagcaatcgctctac
atagataaggacgttggagttccaagagtaactgcaatagttccacatctaaaagcaaga
tgccctgcagcggaggttgaaggcatccaaatgcaaataccggtgcctgggcatcttgat
tctgccagcaaaatggcaagtgtgcttgatgactgcaagcacctgcagacgttagttgct
gccaatgatgcagttttcttgttaactgacacatgggagagcaggtggcttccaactctt
ctgtgtgcaagtgaaaacaagattgctattactgcagtattaggatgtgacagttacgtt
gtcatgcgacatggtgctggtccaggaacaagtgggggtacagatgaattgactgctcag
atagaaaatttgtctacagaagatgcttttggaaatgagagattgggctgttgtttctgc
aatgatgctgtttccctttttaatccaattcctaatggaacactacctggacttacctca
gttgcatctggcaaagcagtggagctctttgctaggatgttacatcatcctgacgagata
catgctccaggtgatattgctggtatggaaacagaacatcagcttggtctattaccacat
cagctgcgaggatcactccctaagtgtgatttatctttggaacttggcaattcctctggc
aactgtactgcatgttcaattgcagtattgtcagagtacagaagaagaggattggatttc
gtcatgcaagctattaactatccaacatatctgaaagatcttacaggcatttctgattct
aagaggccagatacttgtcccaaaatgctggccagcatctctgtaaattcagacaagatt
tctgatgtccgatgtctacttttgggtgctgggactcttggatgtgatgttgctcgcatt
cttatggactgtggtgtacggaagctaacagtggttgatagtggtcgtgtagttgtgtca
aatttggcgagacaatcactctacacttctgatgaccgtggtgccccaaaagcaactgca
atacttaagcatctagtggagaggtgtccttcggtggatgcacaaggcattcagatggaa
atacctatgccagggcatcctgtgtctcctggggaagcagctggtgtgcttcaagattgc
aagcgccttaaggaattagtagcctcccatgatgctatcttcttgttgaccgacacaagg
gaaagtaggtggcttccaactctcctctgcactgatgaaaacaagattgctattactgca
gcattagggtatgatagttaccttgtgatgcgacatggggctggtcctggcaaaagctgt
gaagcttcaaatgtgactgctgccatggataagctgtccacaaaggattcccttggacgt
caaagactggggtgttatttctgcaatgacgtcgttgctcctgttgattctgtctccaat
cgaacactggatcaacaatgtacagtgacacgaccagggctggcctctattgcatctgga
tgtgctgcagacctcttcacaagaatgttacatcatccagatgggatacatgctccagga
gagattgctggtgcaagcagtggccatccgcttggtctattacctcaccagatgcgtgga
tcactttcacagtacaacttattaaccctcatgggctattcctcaagcaattgcacagca
tgttccaatgtggtattgtctgaatatcggaggagaggaatggattttgtgatgcaagtg
atcaacgaaccaacgtatttggaagacctcaccggtcttacgtacttgatgaaatccgca
gcttgctctcaggtcgagtgggtagaaactgatgaagacaattttgtcgagatctga
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integrated database retrieval system
