Panicum virgatum (switchgrass): 120673142
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Entry
120673142 CDS
T07260
Name
(RefSeq) probable zinc metalloprotease EGY2, chloroplastic isoform X1
KO
K25380
zinc metalloprotease EGY, chloroplastic [EC:3.4.24.-]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pvir01002
]
120673142
Peptidases and inhibitors [BR:
pvir01002
]
Metallo peptidases
Family M50: S2P protease family
120673142
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Motif
Pfam:
Peptidase_M50
Transglut_core3
Motif
Other DBs
NCBI-GeneID:
120673142
NCBI-ProteinID:
XP_039809782
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Position
5N:8336858..8341308
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AA seq
634 aa
AA seq
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MGSEWSLPAPAGGGGAATLFLSSRSAANGATTENAPVDGQNYVSGHASRFVRREILAAQK
NFDFPPTRDEIRPRRARSPLLHSHHRLPAMSSSPPSRPSAAAYGCSHRFLLASTTVPVRS
GCSERARSLTVALRCLPIAGHRLRSRRVACQALTETDPEGNGDDEEKEVFGDDASSPSAD
SVAEVNGPAESDSNIDNKKDETTNAELLSSSDAVQNIDGDATTTNHTQENVEVVEVASGS
PLPGMKQQLDDAERIPKATIDILKDQVFGFDTFFVTSQEPYEGGVLFKGNLRGKPAKSYE
KITNRLENKFGGQYKLFLLINPEDEKPVAVVIPRQTLQPETTAVPEWFAAASFGLVTIFT
LLLRNVPVLQDNLLSTFDNLELLKDGLSGALVTGLIIGVHEIGHILAAKESGIKLGVPYF
VPSWQIGSFGAITRIVNIVRNREDLLKLAAAGPLAGFSLGFILLLLGFFLPPSDGLGLVI
DPTVFHESFLVGGLAKLLLGDSLKEGTQLSINPLVLWAWAGLLINAINSIPAGELDGGRI
ALAMWGRKVSSRLSSLTIGLLGIAALFNDVAFYWVVLIFFLQRGPIAPLSEEITDPENNN
IGIGIAILLFGLLVCLPYPFPFDPSQLTDINFDL
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atggggagcgagtggtctcttcctgctccggcgggcggcggcggagccgcaaccctattc
ctctcgtcgcgttctgcggcgaacggggcgactaccgagaatgcccctgtcgacgggcaa
aactacgtgagtggccatgcttcgagattcgtgcggcgtgaaatcctcgccgcacaaaag
aatttcgatttccctccgacgagggatgagataaggccgcgccgcgcgcgctctcctctc
ctccactcccaccaccgcctgcccgccatgagttcctcgccgccgtcgcggccatccgcc
gcggcgtacgggtgctcccaccgcttcctgctcgcgtcgaccactgttccggtgaggagc
gggtgctccgagcgcgcacgaagcctcacggttgcgctccgctgcctcccgattgccggg
cacaggctgaggagtcgaagggttgcgtgccaagcgttgacggagaccgatcccgaaggc
aatggcgacgatgaggagaaagaagtgtttggagatgatgcttcatcaccttcggctgat
agtgttgcagaagtaaatgggcctgcagaaagtgactctaatatagacaataagaaagat
gaaaccacgaatgcagaactgctgagctccagcgatgcagttcagaacattgatggagat
gccactactaccaatcatacgcaggagaatgtggaagttgttgaagtcgctagcggctct
ccattgcctggaatgaagcaacagcttgatgacgctgaaaggattcctaaagctacaata
gacatcctgaaggatcaagtttttgggtttgacacattttttgtgacaagtcaggagcct
tatgagggtggagtattgttcaaagggaatttgcgtggtaaacctgccaagagttacgag
aaaatcacaaatcggctagagaacaaatttggtggtcaatataagctttttcttctcatt
aacccagaggatgagaagccagttgcagtagttatacccagacagacattacagcctgaa
actaccgctgtcccagaatggtttgctgcggcatcatttggattagttaccatcttcact
ttgctgcttcggaatgtacctgttctgcaggacaatttgctatcaacgttcgacaacctt
gaactgttaaaggatggattatctggtgccctggtaaccgggctaataataggggttcat
gaaattgggcatatccttgctgccaaggaaagtggaatcaagcttggggtaccatatttt
gttcctagctggcagataggatctttcggtgccattaccaggattgtcaacattgtccgc
aaccgtgaggacctattgaagctagcagccgctggaccactggcagggttctcccttgga
tttattcttttgttgttgggtttcttcttacctccaagtgatggccttggccttgtgata
gatccaactgtctttcatgagtcatttcttgttggtggtcttgcaaagcttcttcttggg
gattctctgaaagaaggaacccagctatcaataaacccacttgttttatgggcgtgggct
ggtctactgatcaatgctatcaatagcattcctgctggagagcttgatggtgggcgaata
gcacttgcaatgtggggaagaaaggtatcgtctcgactcagcagcctcaccattggactg
ctcggaatcgcagctctcttcaatgacgtggccttctactgggtggtgctgatcttcttc
ctgcagagaggcccaatcgctcctctctccgaggaaataacagaccctgaaaacaacaac
atcggcatcggcattgctattttgctctttgggcttctggtctgcctgccctacccattc
ccctttgacccatcacaattgaccgatatcaattttgacttgtga
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