Panicum virgatum (switchgrass): 120673160
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Entry
120673160 CDS
T07260
Name
(RefSeq) protein DELETION OF SUV3 SUPPRESSOR 1(I)-like
KO
K10881
26 proteasome complex subunit DSS1
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03050
Proteasome
pvir03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
120673160
09124 Replication and repair
03440 Homologous recombination
120673160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvir03019
]
120673160
04131 Membrane trafficking [BR:
pvir04131
]
120673160
03051 Proteasome [BR:
pvir03051
]
120673160
03400 DNA repair and recombination proteins [BR:
pvir03400
]
120673160
Messenger RNA biogenesis [BR:
pvir03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX-2 complex
120673160
Membrane trafficking [BR:
pvir04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
120673160
Proteasome [BR:
pvir03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
non-ATPase subunits
120673160
DNA repair and recombination proteins [BR:
pvir03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
120673160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DSS1_SEM1
Motif
Other DBs
NCBI-GeneID:
120673160
NCBI-ProteinID:
XP_039809815
LinkDB
All DBs
Position
5N:14897837..14901837
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AA seq
75 aa
AA seq
DB search
MATAPAPADPKAEAAKMDLLEDDDEFEEFEIDQEWDDKEEGNEAVQQWEDDWDDDDVNDD
FSQQLRKELEGAQKS
NT seq
228 nt
NT seq
+upstream
nt +downstream
nt
atggcaacggcaccggcgccggcggacccgaaggcggaggcggccaagatggacctcctg
gaggacgacgacgagttcgaggagttcgagatcgaccaagaatgggacgacaaggaagaa
ggcaatgaagctgtccagcagtgggaggacgactgggatgatgatgacgttaatgatgat
ttctcgcagcagctgaggaaagaactggagggagcccagaagagctga
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