Panicum virgatum (switchgrass): 120673167
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Entry
120673167 CDS
T07260
Name
(RefSeq) amino acid transporter AVT1I-like
KO
K15015
solute carrier family 32 (vesicular inhibitory amino acid transporter)
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
120673167
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120673167
Transporters [BR:
pvir02000
]
Solute carrier family (SLC)
SLC32: Vesicular inhibitory amino acid transporter
120673167
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GFIT
Motif
Pfam:
Aa_trans
Motif
Other DBs
NCBI-GeneID:
120673167
NCBI-ProteinID:
XP_039809825
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Position
5N:43895690..43897183
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AA seq
430 aa
AA seq
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MAWQGSPLDEPLLAPGKDGGEDAASMEAQHLRRRDKGASFSRSCLNLSNVISGVGVLSVP
YALAQGGWLSLALFALVGAVCYYTGELVARCMRADGDAVRSYPDIGQLAFGRPGRKAIGA
VMYAELYLVAISFLILEGDNLDKLLPGTSLGLPGGYLLRGKQLFTLVAAVAILPTTWLRD
LSVLAYVSAVGLVASAALTASLVWAGVAEHGFHARGGNVVFSLAGLPTSLSLYFVCFSGH
GVFPTVYTSMRNKKDFTKVLLASSLLCSLNYALTAVLGYLIYGDDVKSLVTLNLPSGKVY
TRVAILTTLITPLAKYALVIQPITAGIEEKLSLTGQGGLPRAAISTAVLVSTVVAACTMP
FFGYLMSFIGSSLNVTVAVLFPCLSYLRIYMPRGGVRRAEVAAIVGILVVGVVVAVVGTC
TSLHQIAGTF
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atggcatggcaggggagccctctcgacgagcccctcctcgctccgggcaaggacggcggc
gaggatgccgcgagcatggaggcgcagcacctccgccgtcgcgacaagggcgcctccttc
tcccggagctgcctcaacctcagcaacgtgatctcaggcgtcggggttctgtcggtgccc
tacgcgctggcgcagggcggctggctcagcctggcgctcttcgccctcgtcggcgccgtc
tgctactacaccggcgagctcgtcgcccgctgcatgcgcgccgacggcgacgccgtccgg
agctacccggacatcggccagctcgcgttcggccgccccggccggaaggccatcggcgcc
gtcatgtacgccgagctctacctcgtcgccatcagcttcctcatcctcgagggcgacaac
ctcgacaagctgctccccggcacgagcctcgggctccccggcggctacctcctgcgaggg
aagcagctcttcacgctcgtcgccgccgtcgccatactcccgacgacgtggctcagggac
ctcagcgtgctcgcctacgtgtcggcggtcgggctcgtcgcgtcggcggccctgacggcg
tccctggtctgggccggcgtggccgagcacggcttccacgccaggggtggcaacgtcgtc
ttcagcctcgccgggctgcccacgtcgctcagcttgtacttcgtctgcttctccggccac
ggcgtcttcccgacggtgtacacctcgatgaggaacaagaaagacttcaccaaggtcctg
ctggcctcctcgctgctctgcagcctcaactacgcgctgacggcggttctagggtacttg
atctacggggacgacgtcaagtcactggtgacactgaacctcccctcggggaaggtgtac
acgagggtcgcgatcctgacgaccctgatcaccccgctcgccaagtacgcgctcgtcatc
cagccgatcacggcggggatagaggagaagctgtcgctcaccggtcagggcggcctcccc
agggcggccatcagcaccgccgtcctcgtcagcacggtggtggcggcgtgcacgatgccc
ttcttcggctacctcatgtccttcatcgggtcctcgctcaacgtcacggtggccgtcctg
ttcccgtgcctgagctacctcaggatctacatgcccagaggaggcgtccgccgcgccgag
gtcgcggcgatcgtcggcatactggtggtcggagttgtcgtcgccgtcgtggggacttgc
acctccctgcaccagattgcgggcacattttga
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