KEGG   Panicum virgatum (switchgrass): 120673171
Entry
120673171         CDS       T07260                                 
Name
(RefSeq) VAMP-like protein YKT61
  KO
K08516  synaptobrevin homolog YKT6
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir04130  SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    120673171
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pvir04131]
    120673171
Membrane trafficking [BR:pvir04131]
 SNARE
  VAMP, Ykt6, Sec22 (R)
   Ykt6
    120673171
SSDB
Motif
Pfam: Longin Synaptobrevin AcrIIA4
Other DBs
NCBI-GeneID: 120673171
NCBI-ProteinID: XP_039809828
LinkDB
Position
5N:64902694..64907283
AA seq 210 aa
MKITALLVLKPSSSGAGSSSSGGGSGPEAVVLANATDGSHFGYFQRSAAREFIVFVARTV
AQRTQPGQRQSVQHEEYKVHSHNRNGLCAVAFMDDHYPVRSAFSLLNKVLDEYQKDFGDS
WKSATADGTQQWPFLTDALTKFQDPAEADKLMKIQRDLDETKIILHKTIESVLARGERLD
SLVEKSSDLSAASQMFYKQAKKTNQCCTIL
NT seq 633 nt   +upstreamnt  +downstreamnt
atgaagattaccgcccttctggtgctgaagccgtcgagttccggcgccgggagctcctcg
tccggtggcgggtcgggcccggaggctgtggtgctcgcgaacgcgacggacgggagccac
ttcggctacttccagcgcagcgccgcccgcgagttcatcgtcttcgtcgcccgaaccgtc
gcacagcgcacccagcctggccagcgtcagtccgtccagcacgaagaatacaaggtccat
tcacacaacagaaatggtctttgtgcggtggcattcatggacgatcactatcctgtacgg
agtgcattttctcttctgaataaggttcttgatgagtaccagaaggattttggggactcc
tggaaatctgctactgcggatggaactcaacagtggcctttcctcacggatgctttgaca
aaatttcaggaccctgcagaggctgacaaattaatgaaaatccagagggacttggatgaa
acaaaaatcatcctacataaaactattgagagtgttcttgccagaggagagagattggat
agcttggttgagaaaagctctgacctgagtgctgcttcacagatgttttacaagcaggca
aagaagacaaaccagtgttgcactatactttaa

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