KEGG   Panicum virgatum (switchgrass): 120673197
Entry
120673197         CDS       T07260                                 
Name
(RefSeq) SAC3 family protein A-like isoform X1
  KO
K23802  SAC3 family protein LENG8/THP3
Organism
pvir  Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pvir03019]
    120673197
Messenger RNA biogenesis [BR:pvir03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     120673197
SSDB
Motif
Pfam: SAC3_GANP CSN8_PSD8_EIF3K
Other DBs
NCBI-GeneID: 120673197
NCBI-ProteinID: XP_039809868
LinkDB
Position
5N:62893225..62905476
AA seq 903 aa
MDSINQNALYYDPQRDVSVSGATQSVTNCEPHVVQSANSYVPRSTSVQHDYNAAQYPNYY
YNYLQAENDSSVHQGVGQLPGAAYQSLTSFQNSGSYVGPTSNTYYNSGTHQTAPGYATSN
YYYHQNNAWVDGSSVNNHAQSYQSYIPDSNVAQSSSSLLASSVHYQQQYNQWPYYYDQSA
QTSWGLAVADSTTSITNVATVVPDYVHLSNQPPPPGTTSWRTDAGNTAAPPAQAGDIQGY
QNQYSPKVQVAPVLQNQYINNTAGIPTLHNQYASSAFQHSSANNNQLPDSETSNGHMVNK
VQIPINPQIAPGLPIGMPKMDESNLEADSSLKPAYVCVSMPKNDVKAAQEGSEAVMQVTG
SFPVSLCTYVERNLARCKDDTQRTASRRILKEIITKATADGALHTKNWDIEPLLTLPEIT
AGATMTSTGTDSSPFSFSSSRSPSRRTKSRWEPVAEEKVTNNVEVPKESAKSNICSSLEP
TKRTSNSWDLRKFVQSRQVPFNQCSQSTTKKQQTGGGANLNENGNASSDSSKEQDIMKYY
PSSIVLANSPEENKRREHRSKRFERSQDVPSKSGSSLPDKDATTNIYKRRAVSLLLNRNY
VDDAGLAVEDLDWDALTIKGTCQNIEKQHLRLTRAPDPAEVRPEDILEKALHMVETSEKN
YLYKCDQLKSIRQDLTVQRIQNELTVKVYESHARLAIQSGDLPEYNQCQSQLKRLYGGGL
KGCNLEFSAYNLLCVMLHSNSKRDLLSSMASLPKEAKKDATVKHALEVRSAVSSGNYVLF
FKLYKVAPNLNSCLMDLYAERMRFEAIKCMSKSYRPTVPIRYAAQILGFVGIDEVYETNG
ADGLEEFKKWLKAHGAVLSVDNNGEVQIDTKVSSTSLYMPEPENAVSHGDASLAVDDFLA
RAS
NT seq 2712 nt   +upstreamnt  +downstreamnt
atggatagtataaaccaaaatgcactttactatgacccccagagggatgtatcagtttca
ggagctactcaaagtgtgacaaactgcgagcctcatgtggttcaatccgctaactcttat
gttcctcgctcaacatcggttcaacatgactacaatgctgcccaatatccaaactactac
tataactatctacaagcagaaaatgattcctctgttcatcaaggagtaggtcaacttcca
ggtgctgcttaccagtctctaacttcgtttcagaattcaggatcttatgttggtcctaca
agtaacacatattataattctggtactcatcagactgcaccaggatatgcaacaagtaac
tattattatcatcaaaacaatgcctgggttgatggaagttctgtgaataatcatgcccaa
tcatatcagagttacatcccagatagtaatgtagcccagagttctagttcactactagca
agctctgtccactatcaacagcagtacaaccaatggccttattattatgatcaatctgca
cagacttcatggggtcttgcagttgctgatagcactacttccattacaaatgttgctact
gttgtccctgattatgtacatctgagcaaccagccacctccaccaggcactacatcatgg
aggacagatgctggtaacactgctgcacctcccgcacaggcaggggacattcaaggatat
caaaaccagtattcccccaaggtccaagtcgccccagtgcttcaaaatcagtatattaac
aacacagcaggtatcccaacgcttcataaccagtatgccagctcagcattccagcatagc
tctgcaaataataatcagctaccggattctgagacatcaaatggtcacatggtaaacaaa
gtacagatcccaataaatcctcaaatagccccaggtcttccaataggaatgcccaaaatg
gatgagtcaaatttagaagctgattcatcactgaaacctgcttatgtttgtgtttcaatg
cccaagaatgatgtgaaggctgcacaagaaggttctgaagcagtaatgcaggtgacggga
tctttccctgtttcactgtgtacttatgttgaacggaatcttgcccgttgcaaggatgat
acccaaaggactgccagccgaagaatcttaaaagagataatcacaaaggcaactgctgat
ggggcccttcatacgaagaactgggacattgaaccactactaactttgccagaaattact
gcaggcgcaactatgactagcactgggacggattcaagtcctttttctttttcatcatca
aggagtcctagtaggcgtacaaaaagtaggtgggagcctgttgcagaggaaaaagttact
aacaatgtggaagttcctaaagaatctgcaaagagtaatatctgcagtagtttggaacca
accaaaagaacgagtaacagttgggatctgaggaagtttgtccaatcccgccaagttcct
tttaatcaatgcagtcagagtactactaaaaagcaacaaactggtggtggtgcaaatcta
aatgaaaatggaaatgcctcaagtgacagtagtaaggagcaggatataatgaaatattac
cccagttcaatcgtactagcaaattcacctgaggaaaataaacgacgggagcatagatcg
aagcgttttgaacggagtcaagatgtgccatcaaaatctgggagttctctaccagataag
gatgccacaaccaacatatataaaaggagagctgtgtcactgcttcttaatagaaattat
gtggatgatgctggcttggcagtggaggatttggattgggatgctctgacaatcaaggga
acatgccagaacattgagaaacaacacctacgccttacaagagcacctgaccctgccgaa
gtacggccagaagatatcctagagaaggctcttcatatggttgaaacatcagaaaagaat
tatctttacaaatgtgatcaactaaagtctattcggcaagaccttactgttcagaggatc
cagaacgagttgactgtcaaggtttatgaaagccatgcacgtttagctattcaatctgga
gatttacctgaatataatcagtgccaatctcagctaaagaggttatatggaggaggactc
aaaggctgtaaccttgaattctccgcttacaacttgctatgtgtcatgctgcactctaat
agcaaaagagatttgctttcatcgatggcaagcttgccaaaggaagccaagaaagacgca
actgtcaagcatgcccttgaagttcgttctgctgtctcatctggcaattatgttctgttt
ttcaaattatacaaggtggcacccaacttaaactcatgtcttatggacctctatgcggaa
cgaatgcgctttgaggctataaaatgcatgtcaaaatcatatcgcccaactgtaccaatc
agatacgctgcacagattttgggatttgtgggaatcgatgaagtttatgagactaatgga
gctgatggactggaagaattcaagaaatggttaaaagcacatggtgctgttctttcagta
gataataatggagaagtgcagatagacacaaaggtttcttctacttctttgtacatgccg
gaacctgagaacgctgtttctcatggtgatgcatctcttgctgttgatgattttttggca
cgagcatcataa

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