Panicum virgatum (switchgrass): 120673202
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Entry
120673202 CDS
T07260
Name
(RefSeq) CRS2-associated factor 2, chloroplastic-like
KO
K27710
CRS2-associated factor 2, chloroplastic
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvir03041
]
120673202
Spliceosome [BR:
pvir03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
120673202
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Gene cluster
GFIT
Motif
Pfam:
CRS1_YhbY
Motif
Other DBs
NCBI-GeneID:
120673202
NCBI-ProteinID:
XP_039809880
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Position
5N:19707150..19711717
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AA seq
617 aa
AA seq
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MPPPPPQRPAPSRAGRANLFSAPPSPLSNRRYPQHRSLPLPPLPPRRRHPRNPAEQRSQE
QQEPADGGPRETTSNDSPAFRTAHLLTAYRKPVPPVAAAGDGEALLAADPADAASGRAVV
VGPSGLSFRLPGAPFDFQFSYSEAPRAPPLAIREPAFLPFAPPTMPRPWTGKAPLLTKEE
KARRRGVRLHTPLGQEPPQTVSPHGIMMEVRGRRQRDLARVSPGDGRTRDEVLGEPLTPA
EVRELVKPHISHNRQLNIGRDGLTHNMLEMIHCHWRRQEICKVRCRGVPTVDMNNLCYHL
EEKSGGKVIHRVGGVVFLYRGRHYDPRTRPRYPLMLWKPATPVYPKLIKEVPEGLTKEEA
DEVRRKGRDLPPICKLAKNGIYITLVKDVRDAFEGHDLVKIDCEGLNPSDYKKIGAKLRD
LVPCVLLSFDNEQILMYRGKEWKSRYSKPLTLIPKVPKNYLTVSSDVSGSDADEATDVSA
QVTVREAVRPKMFKLWKSAVDSSLALLLDDAEANDLTPDSLLTRVEEFSITSQAVEHSFP
ALVVTNHEVDTECLSAEYMNDESETSIAAGNQEDHLDQSPDLSNDEHFELDMLERLESSS
PLGSLPIDTMIEQLNSE
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgccgccaccgccgccgcagcggccggctccctcccgcgccggccgcgcgaacctcttc
tccgccccgccgtctcccctctccaatcgccgctacccgcagcaccggtccctccccctc
ccgccactcccccctcgtcgccgccaccccaggaaccccgccgagcagcgttcccaagaa
caacaggaaccagcagacggcggtccgagagagaccaccagcaacgacagccccgccttc
cgcacggcccacctcctcaccgcgtaccgcaagcccgtgcccccggtcgcggccgccggc
gatggcgaggccctcctcgccgccgacccggccgacgccgcctcgggccgcgccgtcgtc
gtggggccctcgggcctctccttccgcctccccggcgcgccgttcgacttccagttcagc
tactccgaggcgccccgcgcgccgccgctcgccatccgggagcccgcgttcctgcccttc
gcgccgccgaccatgccgcggccctggacgggcaaggcgccgctgctcaccaaggaggag
aaggcgcgccgccggggcgtgcggctgcacacgccactcgggcaggagccgccgcagacc
gtgagcccgcacgggatcatgatggaggtcagggggaggaggcagagggacctggccagg
gtgagccccggcgacggcaggaccagggacgaggtgctcggcgagccgctcactcccgcc
gaggtgcgcgagctcgtcaagcctcacatctcgcacaaccgacagctcaatattggaaga
gatggcttgactcacaatatgttggaaatgatacattgtcattggaggcggcaggaaatc
tgtaaagttagatgccgaggcgttccaactgttgatatgaacaatctctgttatcatctt
gaggagaagtcaggtggaaaggttattcacagagtaggtggcgttgtttttctatatcga
ggaagacattatgacccacggactcgtcctcgctatcccctaatgctctggaaacctgct
actcctgtatatccaaaactcatcaaggaagtcccagaagggcttacaaaagaagaagca
gatgaagtgagaagaaaagggcgcgatctgccgccaatttgtaaattagcaaagaatgga
atatatatcactcttgtcaaggatgtgcgagatgcctttgaaggacatgacctggtgaag
attgattgtgagggtttgaatccaagtgactacaaaaagataggggcaaaactaagggat
cttgttccttgtgttcttttatcatttgataatgaacagatattaatgtacagaggcaaa
gaatggaaatcaagatactcgaagcctctgactctcattccaaaagttccaaagaattat
ctgacagtgtcatctgatgtgagtggttcagatgccgatgaagccaccgatgtgagcgct
caagtcacggtaagagaagcagtaaggcccaaaatgtttaaattgtggaagagtgcagtg
gactcgtctctggcattgctgctggatgatgctgaagcaaacgatctcacacccgattca
ctcctgacgagggttgaggagttcagcatcacatctcaggcagtggagcactcatttcca
gctctggttgtgaccaatcacgaggtggacaccgaatgtctaagtgccgagtacatgaac
gatgagtctgaaacgagcattgctgccggaaaccaagaggaccatcttgatcaatcacct
gatctcagcaacgacgaacactttgaacttgacatgctcgagcgcctggagtcatcgtcg
ccattaggatcgctgccgatcgacactatgatagagcagctgaacagtgagtga
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