Panicum virgatum (switchgrass): 120673211
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Entry
120673211 CDS
T07260
Name
(RefSeq) 16.9 kDa class I heat shock protein 1-like
KO
K13993
HSP20 family protein
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120673211
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pvir03110
]
120673211
Chaperones and folding catalysts [BR:
pvir03110
]
Heat shock proteins
HSP20
120673211
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP20
DUF4488
ArsA_HSP20
DUF7127
Secretin
Motif
Other DBs
NCBI-GeneID:
120673211
NCBI-ProteinID:
XP_039809894
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Position
5N:complement(8789355..8789922)
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AA seq
146 aa
AA seq
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MSLVRRGNVFDPFSMDLWDPFDSMFRSIVPSSSSGSDTAAFANARIDWKETPEAHVFKAD
LPGVKKEEVKVEVEDGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPEDAKALL
QSVVALLWCVYCCSACHGSACSGVMC
NT seq
441 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctcgtcaggcgcggcaacgtgttcgaccccttctccatggacctctgggacccc
ttcgacagcatgttccgctccatcgtcccatcgtcctcctccggctccgacaccgccgcc
ttcgccaatgcccgcatcgactggaaggagacccccgaggcgcacgtcttcaaggccgac
ctccccggcgtcaagaaggaggaggtcaaggtggaggtggaggacggcaatgtgctggtc
atcagcggccagcgcagcaaggagaaggaggacaagaacgacaagtggcaccgcgtcgag
cgcagcagcggccagttcatgaggcgcttccgcctgccggaggacgccaaggcgctacta
cagtctgtcgttgctctgctttggtgtgtgtactgttgttcagcctgccatggtagtgcc
tgctctggtgtcatgtgctag
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