Panicum virgatum (switchgrass): 120673242
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Entry
120673242 CDS
T07260
Name
(RefSeq) RGG repeats nuclear RNA binding protein C-like
KO
K13199
plasminogen activator inhibitor 1 RNA-binding protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvir03041
]
120673242
Spliceosome [BR:
pvir03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
120673242
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HABP4_PAI-RBP1
Stm1_N
Motif
Other DBs
NCBI-GeneID:
120673242
NCBI-ProteinID:
XP_039809934
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All DBs
Position
5N:complement(54770046..54773189)
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AA seq
375 aa
AA seq
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MATLNPFDLLGADDGDDPSQLIAAAAAAAQKAEAKKAAAAPAGKAAQPAAAAKFPTKPAP
PSQAVRDARGGGAPARGGYVRGERGRGRGGRGYGQNRDFGGETANGFQGGYGGGGFGDGA
VTGGAEGERERGPRPPYRGGGRRGGYRNGEFGDDSERPPRRNYERHSGTGRGYEMKRDGA
GRGNWGTATDEVLAQETEEALKVEEGAPIAEKQGEQNDAPAADENKDNKDAAAEEEEKEE
DKEMTLEEFEKIREEKRKALLSLKTEERKVEVDKDLQSLQPLSNKKENDEVFIKLGSDKD
KKESAERDERAKKSLSINEFLKPAEGERYYGGRGRGRGRGERGGYRGGYAGGYNRGPAAA
PSIEDQAQFPSLGGK
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggccaccctcaacccgttcgacctcctcggcgccgacgacggcgacgacccgtcgcag
ctgattgccgccgcggcggcggcggcgcagaaggccgaggcgaagaaggccgccgcggcg
cctgctgggaaggcggcccagcccgcggcggccgccaagttcccgactaagcccgctccc
ccctcgcaggctgtgagagatgcacgcggtggtggtgcaccagctcgtggtggctatgtc
cgtggtgaacgtggccgtggcagaggtggacggggatatggccagaaccgcgacttcggt
ggtgaaactgccaatggcttccagggaggttatggtggcggaggctttggggatggtgct
gtaactggtggagctgaaggggaaagggagagaggccctcgccccccttaccgtggagga
ggcagacgtggtggctacaggaatggtgagtttggtgatgactctgagaggccacctcgg
agaaactatgaacgccacagtggaactggccgtgggtatgagatgaagcgtgatggcgca
gggcgtgggaactggggaactgccactgatgaagttcttgcccaggaaactgaggaagct
ctcaaggtggaggagggtgctcctattgctgagaaacagggcgagcagaatgacgccccg
gctgctgatgagaacaaagataacaaggatgctgctgctgaggaggaagaaaaggaagag
gacaaggagatgactctggaggagtttgagaaaataagggaggagaagaggaaagcacta
ctttcattgaagactgaagagagaaaggttgaagttgataaggatctgcagtctctgcag
ccgctctcaaacaagaaagaaaatgatgaagttttcattaagctgggttctgacaaggat
aagaaggaaagtgctgagcgtgatgagcgcgccaagaagtcgctgagcatcaatgagttc
ctgaaacctgctgaaggagaaaggtactatggtggtcgtggtcgtggaaggggccgcggg
gagcgtggcggttatagaggtggatatgctgggggttacaatcgtggcccagctgctgcc
ccatccattgaggatcaagctcagttcccaagccttggtgggaagtga
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