Panicum virgatum (switchgrass): 120673269
Help
Entry
120673269 CDS
T07260
Name
(RefSeq) AMSH-like ubiquitin thioesterase 2 isoform X1
KO
K11866
STAM-binding protein [EC:
3.4.19.12
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120673269
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pvir01002
]
120673269
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120673269
04121 Ubiquitin system [BR:
pvir04121
]
120673269
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
120673269
Peptidases and inhibitors [BR:
pvir01002
]
Metallo peptidases
Family M67
120673269
Membrane trafficking [BR:
pvir04131
]
Endosome - Lysosome transport
Others
Others
120673269
Ubiquitin system [BR:
pvir04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
120673269
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
JAB
Prok-JAB
Motif
Other DBs
NCBI-GeneID:
120673269
NCBI-ProteinID:
XP_039809963
LinkDB
All DBs
Position
5N:50060532..50067050
Genome browser
AA seq
272 aa
AA seq
DB search
MSSRRYDINAWRCGTQSTPSKSMYLDAQQVVHCQATGRDVGPCAVKHHFPSPIVSWIEDL
SSFGSVSFSPDSEYVDEQARASVGQSSTSSNLHDMQISVRLTEEFMELAKENTSSNLETC
GILGASFRDGTYFVTMLIIPKQEGTAHSCQAVNEEEIHAVLSEQSLYPAGWIHTHPSQTC
FLSSIDLHTQYSYQVMLPEAVAIVVAPTDPTRSYGIFRLTDPGGMEVLRGCDESGFHTHR
ETTDGSPIYETCSKVHFNPNLRFEIVDLRSGA
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgagtagcagaagatatgacatcaatgcttggagatgtgggactcaatcaacgccaagt
aaatcgatgtatctagatgctcaacaagttgtccactgccaagctacaggccgtgatgtt
ggcccctgcgctgtgaagcatcacttcccatcgccaatcgtatcttggatagaagatctt
tcgagctttggcagtgtttcttttagccccgattctgaatatgtggatgagcaagccagg
gcttcagtgggacagtcttcaacatcaagcaatttgcatgacatgcaaatatcagtgagg
ttgacagaagaattcatggagcttgcaaaggagaacacaagcagtaatctagagacttgt
ggaattctcggtgcttcatttagggatggaacttactttgtgacaatgttgattatacca
aagcaagaaggaactgctcactcatgtcaggctgttaatgaggaggagatacatgccgta
ttatcagagcagtcactttaccctgcaggatggattcatactcatccttcgcaaacatgc
ttcctgtcatcgattgatttgcatactcaatactcttaccaggttatgttaccagaagct
gttgcaattgtggttgcacccaccgatcctaccaggagttacggaatatttaggctaact
gatcctggagggatggaggtgcttagggggtgcgatgaaagtggattccacactcaccga
gagacaaccgacggcagtccaatctatgaaacttgttcgaaggtgcacttcaatcccaat
ttgcggttcgagattgtcgacctgcgttctggtgcatga
DBGET
integrated database retrieval system
