Panicum virgatum (switchgrass): 120673272
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Entry
120673272 CDS
T07260
Name
(RefSeq) auxin response factor 2-like isoform X1
KO
K14486
auxin response factor
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
120673272
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GFIT
Motif
Pfam:
Auxin_resp
B3
Motif
Other DBs
NCBI-GeneID:
120673272
NCBI-ProteinID:
XP_039809969
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Position
5N:complement(50793559..50798999)
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AA seq
751 aa
AA seq
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MAGIDLNTVEGEEDEEEPEAPRADGAVCLDLWHACAGPVAPLPRKGSAVVYLPQGHLEHV
GGDAAPPAAVPPHVFCRVVDVNLHVSVSVRARARARRGLRSRGTVPASAMCSRYWLIERA
FVSVQADGATDEVYARVSLLPEDEEAERRGRARAREDEDAARDGEGGGAMKPLARTPHMF
CKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSLQRPSQELVAKDLHGTEWKFRHIYRGQP
RRHLLTTGWSAFVNKKKLVSGDAVLFLRGEDGVLQLGVRRAAQLKNVNLIPALHNQCSNH
RNLGNVTQAVALRTVFHICYNPRLSQSEFIVPYWKFMRSFNQPFSVGMRCRMRYESDDAS
ERRCTGIIIGSREAEPMWHGSKWKSLAVRWDDDIERCRSNRVSPWEIELTGSVSGSQSHL
CVPNSKRLKPCLPQVNTEIVLPYGSVSSDFAGSARFHKVLQGQEFLGFKTHDDTAVSALQ
ATEARNLQYNDEHSSSINNSNNILGVPRFGVRSPTGTPGFPYHCSGFGESQRFQKVLQGQ
EVFRSFRGALADVHIRTSGMYQPDCMHATGAAYKWPTPQGCDFRQPTKPVLLQASSPSSV
LMFPQTSSKVPHLEYGYSCLDKDDTGRNDRAFPTQDMGRSNQALSLWPHLVSGEAIDECT
GTEKMHSPVSDAEHESNNESTVENGCKIFGISLAEQVRSCDEADSCNANCNSRFQPSEPQ
MSKSLGSCWATVHEQRPTVGRVVDVSLMDMI
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcatcgacctcaacaccgtcgagggggaggaggacgaggaggagccggaggcg
ccgagggcggatggcgcggtgtgcctggacctgtggcacgcgtgcgcggggcccgtcgcg
ccgctgccacggaagggcagcgccgtcgtgtacctgccgcagggccacctcgagcacgtc
ggcggggacgcggcgccgcctgcggcggtgccgccgcacgtcttctgccgcgtcgtcgac
gtcaacctccacgtgagtgttagcgtgcgcgcgcgcgcgcgcgcgcggcgcgggcttcgg
tcgcgcggtacggtgcccgcgagcgcaatgtgctcgaggtattggctgatagagagagct
tttgtttccgtgcaggcggacggcgcgacggacgaggtgtacgcgcgggtgtcgctgctg
cccgaggatgaggaggcggagcggcgcgggcgggcgcgggcgcgggaggacgaggacgcg
gctcgcgacggcgagggcgggggcgccatgaagccgctcgcgcggacgccgcacatgttc
tgcaagacgctcacggcctccgacaccagcacgcacggcggcttctccgtgccgcgccgc
gccgccgaggactgcttcccgccgctggactacagtctgcagaggccgtctcaggagctc
gttgccaaggatctgcacggcactgagtggaagttccgtcatatctatcgaggccaacca
cgaaggcatctcttaaccactggatggagcgcatttgttaataagaaaaagctggtctct
ggagatgccgttctgttccttcgtggtgaagatggagtgcttcaattgggtgttcgccga
gcagcacagcttaaaaacgtaaatcttattcctgcgctgcataaccagtgctcaaatcat
aggaatctaggaaatgtcacacaagctgtggccttgaggactgtttttcacatctgctac
aatcccaggctaagccaatctgaattcattgtaccctattggaagttcatgagaagcttc
aatcaaccattttctgttggaatgagatgcagaatgagatatgaaagcgatgatgcttct
gaaagaaggtgcactgggataataattggaagcagagaggcagagcctatgtggcatggt
tcaaaatggaaatccttggcggtcagatgggatgatgatatagagcgctgtcggtccaat
agggtttctccttgggagattgagcttacaggatcagtttcaggatctcaatcccatctg
tgcgttccgaattcaaaacgtctgaaaccatgcctcccccaagttaacacggagatcgtg
cttccatatggaagtgtttcttcagattttgcgggatctgccagattccacaaggtcttg
caaggtcaagaatttttgggtttcaaaacccatgatgatactgctgtttcagctttgcag
gcaactgaagcaagaaatttgcagtacaatgatgaacatagtagctctatcaataacagt
aacaatatcttaggggttccaagatttggtgttagatctccaactggaacccctgggttt
ccctaccattgctcaggctttggagaatcacaaagattccaaaaggtcttgcaaggtcaa
gaagtgtttcgttctttccgaggagctttggctgatgtccatataaggacttctggcatg
tatcaacctgactgtatgcatgcgactggtgcagcttataaatggcctacaccacaaggg
tgtgattttcgacagccaacaaaaccagttctgttgcaagcatcctccccatcatctgtg
ctgatgtttccacaaactagttctaaggtacctcacttggagtatgggtacagctgcctg
gataaggatgacactggtagaaatgatcgggctttccctactcaagacatgggaagaagc
aaccaagcattatccctttggcctcatcttgtttcaggcgaagccatagatgaatgtact
ggaactgagaagatgcactcccctgtcagtgatgcagagcatgaatcaaacaacgagagt
accgttgaaaatggctgcaaaatctttggtatctcattggctgaacaggtccgatcatgt
gatgaagcagactcttgcaatgcaaattgtaattctcggttccagccttcagagccacaa
atgtcaaaatcactaggcagctgttgggccactgttcatgagcaaaggcccactgttggc
agggtggttgatgtctcgctgatggatatgatctga
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