Panicum virgatum (switchgrass): 120673301
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Entry
120673301 CDS
T07260
Name
(RefSeq) transcription factor TGAL1-like isoform X1
KO
K14431
transcription factor TGA
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
120673301
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120673301
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Basic leucine zipper (bZIP)
Plant bZIP factors
120673301
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DOG1
bZIP_1
bZIP_2
bZIP_Maf
Motif
Other DBs
NCBI-GeneID:
120673301
NCBI-ProteinID:
XP_039810008
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All DBs
Position
5N:complement(60746052..60754278)
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AA seq
448 aa
AA seq
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MRSFGPPQHSIHTDMNSMQPSQVTNFGALAQSAGFRIEDLANLNTSTLFNLKTNTINNNP
LQFGSYGKPISPSHINTTTTATAAVRIDPQSLEQQTGAQQNLVALPTGNIENWGESAMAD
SPMIDTSTDPDTDERNQMFEQGLVAGPTASDSSDKSRDKLDQKTLRRLAQNREAARKSRL
RKKAYIQNLESSRLKLTQLEQELQRARQQGIFISTSGDQPQSANGNGALAFDMEYARWLE
EHNKHVNELRAAVNAHAGDNDLRGIVDSIMAHYDEIFRLKGVAAKADVFHVLSGMWKTPA
ERCFMWLGGFRSSELLKLLAGQLEPLTDQQLVGISNLQQSSQQAEDALSQGMEALQQSLA
ETLASGSLGPAGSSGNVANYMGQMAMAMGKLGTLENFLRQADNLRLQTLQQMQRILTTRQ
SARALLAISDYFSRLRALSSLWLARPRE
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgcggagcttcgggcctcctcagcactccatccacacagatatgaacagcatgcaacct
tctcaagttaccaactttggggcgcttgcacagtctgccggattccgaatagaagatctt
gctaatcttaatactagcactttgttcaatctgaagacaaatacaattaacaacaatcct
cttcagtttggaagttacggaaagcctatttctccatctcatataaatactacaaccaca
gcaacagctgcagtgagaattgaccctcagtcactagaacagcaaacaggagctcaacaa
aatctagtggctttaccaactggtaacatcgagaactggggagagtcagctatggctgat
agtcctatgattgacacatcaacagatccagatactgatgagaggaatcagatgtttgaa
caaggactggttgctggccccacagcttctgattctagtgacaaatcaagggacaaatta
gatcagaagacacttcgtcgtcttgcccaaaatcgtgaagctgccaggaaaagccgttta
agaaagaaggcgtacatccaaaaccttgagagtagcagactgaaacttactcagttagag
caagagcttcagcgggctcgccaacagggtatatttatttcaacatcaggagatcaacct
caatcagcaaacggaaatggagctttggcatttgacatggagtatgcacgctggttggag
gagcacaataaacatgtaaatgagttgagggctgctgtcaatgcacatgctggagacaat
gatcttcgaggtattgttgatagcatcatggcacactacgacgaaattttcaggctcaag
ggtgtggcagcaaaagcagatgttttccatgtgctgtccgggatgtggaagacccctgct
gagaggtgtttcatgtggttaggtggtttccgatcatctgagcttctgaagttattggca
ggtcagctagagcctcttactgatcagcagcttgttggtatatccaacctgcaacagtcc
tcccaacaagcagaggatgctctttcccaagggatggaagcattacaacagtcacttgca
gaaactctagcatctggatccctgggccctgctggatcttctggcaatgttgcgaattac
atgggacaaatggcgatggctatgggaaaacttggcacccttgaaaacttcctacgacag
gctgataatctgcggctacaaacacttcagcaaatgcaacgcatcttaaccacgcggcaa
tctgcacgagctctacttgcaataagcgactacttctctcggctgcgtgctctgagttct
ctttggcttgctcgtccacgggaataa
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