Panicum virgatum (switchgrass): 120673368
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Entry
120673368 CDS
T07260
Name
(RefSeq) conserved oligomeric Golgi complex subunit 4-like isoform X1
KO
K20291
conserved oligomeric Golgi complex subunit 4
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120673368
Membrane trafficking [BR:
pvir04131
]
Endosome - Golgi transport
Tethering complex
Conserved oligomeric Golgi (COG) complex
120673368
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Gene cluster
GFIT
Motif
Pfam:
COG4_m
COG4_C
COG4_N
RINT1_TIP1
ZW10_C2
Motif
Other DBs
NCBI-GeneID:
120673368
NCBI-ProteinID:
XP_039810105
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Position
5N:complement(29390597..29395195)
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AA seq
762 aa
AA seq
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MAVPSPSSTPRSPRRPEVIAAPDPSTVVAQPSIDFGDPACLAALRALTDAGAATRLLHEC
VAYQRALDARLDSLLARRVDIDRAAASLLRSAPPLLSLAASDATALKESSSSTAALADAL
SSRVRHLDAAHSRADAALARAEAALDRSRVLEAARRALAADDLVAAATAAHEFLTIDARF
PTDDNLRRDLLDIKRRLEGLARRRLTAAVDAQDHPAVLRLVRLFPLLALADEGLQVYVAY
LKKVVTLRARVDFEHLADLTSATQPISERPDFVGCLTRLFKDIVLAAEENDAVLRELRGE
DGVAYAIIELQEECDSRGTQILRRYADYRKLAHLASDINSYTKNLLSVVGSMASAAGGNE
GPDPREIELYLEEILALTQLGEDYTEFMVNKIRGLRDVKPELGPQAMKAFRNGSFNKMEQ
DLTGFYVIFEEFFMVENVRKAIRIDEHVPDGPTTSMVDDVFFVLQSCCRRAASTANINSV
LTVLGGATSLLSNEYQEALQWRMREPNLGAKLFLGGVGVQKTGEEIATALNNMDISSEYV
LKLRHEIEELCAEVFHAPADREKIKSCLSELGDVSASFKKILHSGMEHLVASVAPRIRPV
LDTVATVSYELADAEYGENEVNDPWVQKLILGVNTNVAWLQPVMTSNNYDSFVHLIIDFI
VKRLEVIMMQKRFSQLGGLQLDKEVRSLINHFSEMSQRPVRDKFSRLSQISTILNFERVS
EILDFWGDNAGHLTWLLTPAEVRRVLGLRIDFRPEAIAALRL
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgccgtcgccctcttccaccccgcgctccccgcgccgcccggaggtcatcgcg
gccccggacccctcaaccgttgtagcgcaaccgtccatcgacttcggcgacccggcctgc
ctcgccgcgctccgtgcgctgactgacgctggcgccgccacccgcctcctccacgagtgc
gtcgcctaccagcgcgccctcgacgcccgccttgattctctcctcgcccgccgggtcgac
atcgaccgcgccgccgcctctctcctccgctcggccccgccgctgctctcgctcgcggcc
tccgacgccaccgcgcttaaggagtcctcctcttccacagcggcgctcgccgacgcgctc
tcctcccgcgtccgccacctcgacgcggcgcattccagggcggacgccgcgctggcgcgc
gccgaggctgcgcttgatcggtcccgcgtgctcgaagcagcacggcgggccttggccgct
gacgatctcgtcgctgctgccacagctgcgcacgaattcctcaccatcgacgcacggttc
cccaccgacgacaacctccgccgcgacctgctagacatcaagcgccgcctcgaggggctc
gcgcgacggaggctcactgctgcggtggacgcacaggaccaccctgctgtgctccgtctc
gtccgcctattcccactcctagcgcttgctgatgagggactacaggtctatgttgcttac
ctgaagaaggtggtcacactccgtgcccgtgtagactttgagcacctcgctgatctcacg
tctgcaacccagccaatctctgagcggccagattttgttggctgcctcactcgtctcttc
aaggacattgtgctcgctgctgaggagaatgatgctgtgcttcgtgagctcaggggtgaa
gatggtgttgcttatgctatcattgagctgcaggaggagtgtgattcgcggggcacccag
atccttcgccggtatgctgattacaggaagctcgcacatcttgcatcggatattaactcc
tatacaaagaacctcctttcagttgtgggttccatggccagtgctgctggaggtaacgaa
gggcctgatcccagggaaattgagctttatcttgaggagattcttgcattaacacagctt
ggagaagactacaccgaatttatggtgaataagatccgtggattgagagatgtcaagccc
gaacttgggccgcaggcgatgaaggccttccgtaatggtagctttaataaaatggagcag
gatctgactgggttctatgtgatctttgaggagtttttcatggtggagaatgtaaggaaa
gccatacggattgatgagcatgtaccagatggtcccacaacctcaatggtggatgacgta
ttctttgtactgcagagttgctgccgtcgggctgcatccactgcaaatattaactcggtt
cttactgtgcttggtggggcaacgagccttctgagcaatgagtatcaggaggctctacag
tggaggatgcgggagccaaatttgggtgctaagctgttccttggtggtgttggagtccag
aagactggtgaggagattgcgactgcgctaaacaacatggatatcagctctgaatatgtt
ctcaagctccgtcatgagattgaggagctctgtgcagaggtttttcatgctccagctgac
cgagagaagatcaaatcctgtttatcagagctaggagatgtcagtgcttccttcaagaag
atccttcattctggaatggagcatttggtggcatctgtggcaccacgcattcgtccagtc
cttgacactgttgctactgtcagttatgagctggctgatgctgaatatggggaaaatgag
gtgaacgacccatgggtgcagaagcttatacttggagttaacactaatgttgcgtggctc
cagccagtgatgacatcaaacaactacgattcctttgtgcacttgatcattgacttcata
gtcaagaggctcgaggtgattatgatgcagaagaggttcagccagcttggtgggcttcag
ctagacaaagaggtccgttctttgatcaaccatttctcagaaatgtcccagagaccggtc
cgagacaagttctcaaggctttcccagatttcgaccattcttaactttgagcgtgtatcg
gagatactggatttctggggtgacaatgctggtcatctgacatggctgttgacacccgca
gaggtgcgaagggtgttaggacttaggattgacttcaggcctgaagccattgctgctctg
aggctctaa
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