Panicum virgatum (switchgrass): 120673404
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Entry
120673404 CDS
T07260
Name
(RefSeq) probable glucuronosyltransferase Os01g0926600
KO
K20870
putative beta-1,4-xylosyltransferase IRX10 [EC:2.4.2.-]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pvir01003
]
120673404
Glycosyltransferases [BR:
pvir01003
]
Polysaccharide
Structural polysaccharide
120673404
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Gene cluster
GFIT
Motif
Pfam:
Exostosin_GT47
RXYLT1_C
Motif
Other DBs
NCBI-GeneID:
120673404
NCBI-ProteinID:
XP_039810156
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Position
5N:complement(69348802..69351749)
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AA seq
415 aa
AA seq
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MGTGGAPAPALALALLLACAHVALVAAQDTERIEGSAGDVLEDDPVGRLKVYVYELPTKY
NKKMVAKDSRCLSHMFAAEIFMHRFLLSSAIRTLNPEEADWFYTPVYTTCDLTPWGHPLP
FKSPRIMRSAIQFISKHWPYWNRTEGADHFFVVPHDFGACFHYQEEKAIERGVLPLLRRA
TLVQTFGQKDHVCLKEGSITIPPYAPPQKMKTHLVPPETPRSIFVYFRGLFYDTANDPEG
GYYARGARASVWENFKNNPLFDISADHPPTYYEDMQRAVFCLCPLGWAPWSPRLVEAVVF
GCIPVIIADDIVLPFADAIPWEEIGVFVAEDDVPKLDTILTSIPMEVILRKQRLLANPSM
KQAMLFPQPAQPGDAFHQILNGLVRKLPHGKDVFLKPGQKVLNWTEGPRGDLKPW
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggggacgggtggcgcgccggcgccggccctggcgctcgccttgcttctcgcctgcgcc
cacgtcgccctcgtcgcggcgcaggacaccgagcggatcgaaggaagtgctggtgatgtg
ctagaagatgatcctgtcgggaggctcaaggtatatgtgtatgagttgcccaccaagtac
aacaagaagatggtggccaaggattctagatgcctcagccacatgtttgctgcagagatc
ttcatgcaccggtttctattgtctagtgcaatccggactttaaatccagaagaagctgat
tggttctatactccagtatacacgacatgcgacctgactccatggggtcatcccttgccc
ttcaagtctccaaggataatgagaagcgcaattcagttcatttccaagcactggccatac
tggaacaggacagagggagcagatcatttctttgttgtcccacatgactttggtgcatgc
ttccattaccaggaagagaaagctattgagcgaggagtccttccattgcttcgccgtgcg
acgctggtccagacttttgggcagaaagatcatgtctgcctaaaggaaggctccattacc
atcccaccatatgcacccccgcagaagatgaaaactcaccttgttcccccagagacccct
cgttcaatctttgtctatttccgtggtttgttctatgatactgcaaatgatcctgagggt
ggttactatgcaaggggcgcccgtgcatcagtgtgggagaatttcaagaacaacccgctg
ttcgacatatcggcagaccacccaccaacttactatgaggacatgcagcgtgccgtcttc
tgcttgtgcccactgggctgggccccatggagcccccgtttggtggaggcagtggtcttt
ggctgcatcccagtgatcattgctgatgacatcgtccttccctttgcggatgctatccca
tgggaggaaatcggtgtctttgtggccgaggacgacgtccccaagctggacaccatcctg
acctccataccaatggaagtgatcctccggaagcagaggctgctcgcgaacccatcgatg
aagcaggccatgctgttcccgcagcccgcccagcccggtgatgccttccaccagatcctg
aatgggctggtgcggaagctgccccatggcaaggatgtgttcctgaagcctgggcagaag
gtgctgaactggaccgagggcccccggggtgatctgaagccgtggtag
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