Panicum virgatum (switchgrass): 120673439
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Entry
120673439 CDS
T07260
Name
(RefSeq) PHD finger protein ALFIN-LIKE 6 isoform X1
KO
K26274
PHD finger protein ALFIN-LIKE
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120673439
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
120673439
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GFIT
Motif
Pfam:
Alfin
PHD
PHD_NSD
PFF1_TM
TMEM214
Motif
Other DBs
NCBI-GeneID:
120673439
NCBI-ProteinID:
XP_039810198
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Position
5N:complement(66410211..66414686)
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AA seq
255 aa
AA seq
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MDGGGSGAAPYAARTAEEVFRDYRARRAGMIKALTTDVDKFFKLCDPEKENLCLYGYPNE
TWEVTLPAEEVPPEIPEPALGINFARDGMNEKDWLALVAVHSDSWLLSVAFYFGARFGFD
KEARKRLFSMINNMPTIFEVVTGSAKKQTKEKTPNSSSKSNRPSSKVQSRAESRSKAKVP
KDEEESGDDDGDEAEEHDNTLCGTCGTNDGKDQFWICCDNCEKWYHGKCVKITPARAEHI
KQYKCPDCTNKRARA
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atggacggcgggggctccggggcggcgccgtacgcggcgcgcaccgcggaggaggtcttc
cgcgactaccgcgcccgccgcgccggcatgatcaaggccctcaccaccgatgtggacaag
ttcttcaagctctgcgaccccgaaaaggagaacctgtgcctttatgggtatcccaatgag
acgtgggaggttaccttgccagctgaggaggtgcccccagagatccctgaaccagcatta
ggaatcaactttgctagggatggtatgaatgagaaggactggctggcgctagttgcagtt
cacagcgattcctggttactgtctgttgcattctactttggtgcccggtttgggtttgac
aaagaagctaggaagcgactctttagcatgataaacaacatgcctacaatatttgaggta
gtgacaggatcggccaagaagcagacaaaggagaagacgcctaacagtagcagcaagagc
aacaggcctagttcaaaagtgcagtcaagagctgagtctcgttcaaaggccaaggtcccc
aaagatgaagaagagagtggcgacgatgatggggatgaggcggaagagcacgacaacacc
ctgtgtggaacttgcggaaccaacgatggcaaggaccagttctggatctgctgtgataac
tgcgagaagtggtaccatggcaagtgcgtcaagatcacgcccgcccgagctgagcatatc
aagcagtacaagtgcccggattgcaccaacaagagggccagggcatga
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