Panicum virgatum (switchgrass): 120673485
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Entry
120673485 CDS
T07260
Name
(RefSeq) transcription factor CSA-like
KO
K09422
transcription factor MYB, plant
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120673485
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
120673485
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Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Myb_DNA-bind_7
DUF6581
Motif
Other DBs
NCBI-GeneID:
120673485
NCBI-ProteinID:
XP_039810266
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Position
5N:complement(15184439..15185985)
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AA seq
321 aa
AA seq
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MVHEMACFSGRAPPAAALSPFHDEHEPAVVSEEVYHGHAEGLEDASCGRGHGAGGGLGKL
CTRGHWRPAEDAKLKELVAQHGPQNWNLIAENLDGRSGKSCRLRWFNQLDPRINRRAFSE
EEEERLLAAHRAYGNRWALIARLFPGRTDNAVKNHWHVLAARKHREQSGAIRRRKPSSSC
TATTSSSHFAPTPAVVGHRHDRSPPVAFHAGGAHAQHGVRTEAAAATTRACSGGESEGSA
STCTTNLSLGSAGAAAAPCFYQSSNDDAAGYDVAPRAAAFAPGARSAFSVPSPARHRAAA
SDDGCGKLARPFYDFLGVGAT
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atggttcatgagatggcttgtttctccggccgtgctccaccggcggcggctctgtctccg
ttccacgacgaacatgagccggccgtcgtttcggaggaggtgtaccacggccatgcagag
ggcctggaggatgctagctgcggccgcggccacggcgccggtggtgggctggggaagctg
tgcacgagaggccactggcggcccgccgaggacgccaagctcaaggagctcgtcgcgcag
cacgggccccagaactggaacctcatcgccgagaacctcgacggccgatcagggaagagc
tgccggctgcggtggttcaaccagctggacccgcggatcaaccggcgggccttctccgag
gaggaggaggagcgcctcctggcggcgcaccgcgcctacggcaacaggtgggcgctcatc
gcccgcctcttcccggggcgcaccgacaacgccgtcaagaaccactggcacgtcctcgcc
gcgcgcaagcaccgcgagcagtccggcgcgatccgacgccgcaagccctcctcctcctgc
accgccaccacctcctcgtcgcacttcgcgccaacccccgccgtcgtcggccaccgccac
gaccgctcccctcccgtggcgttccacgccggcggtgcgcacgcccagcacggcgtccgc
acggaggcggcggccgcgaccacccgcgcgtgcagcggcggcgagtccgaagggtccgcg
tccacctgcaccaccaacctctccctcggctccgccggcgcggccgccgccccctgcttc
taccagagttcgaacgacgacgccgcaggctacgacgtggcccctcgcgccgccgcgttc
gcgcccggcgcgcggtccgcgttctccgttccctcgccagcgcgccaccgggcggcggcc
tccgacgatggctgcggcaagctcgcccggcccttctacgacttcctcggcgtcggtgcg
acatga
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