Panicum virgatum (switchgrass): 120673495
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Entry
120673495 CDS
T07260
Name
(RefSeq) isocitrate dehydrogenase [NAD] catalytic subunit 5, mitochondrial-like
KO
K00030
isocitrate dehydrogenase (NAD+) [EC:
1.1.1.41
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00020
Citrate cycle (TCA cycle)
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir01200
Carbon metabolism
pvir01210
2-Oxocarboxylic acid metabolism
pvir01230
Biosynthesis of amino acids
Module
pvir_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pvir_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
120673495
Enzymes [BR:
pvir01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.41 isocitrate dehydrogenase (NAD+)
120673495
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GFIT
Motif
Pfam:
Iso_dh
Motif
Other DBs
NCBI-GeneID:
120673495
NCBI-ProteinID:
XP_039810277
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Position
5N:15353656..15358346
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AA seq
365 aa
AA seq
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MALRRLLHGSVLPRVSSRAFAPAVAPFSTEAGETVRATLFPGDGIGPEIAESVKQVFNVA
GVPIEWEEHYVGTEVDPRTESFLTWESLESVRRNKVGLKGPMATPIGKGHRSLNLTLRKE
LGLYANVRPCNSLPGYKTRYDDVNLVTIRENTEGEYSGLEHQVVRGVVESLKIITRQASL
RVAEYAFHYAKANCRERVSAIHKANIMRKTDGLFLKCCREVAEKYPEIQYEEVIIDNCCM
TLVKKPGLFDVLVMPNLYGDIISDLCAGLVGGLGLTPSCNIGEGGICLAEAVHGSAPDIA
GKNLANPTALMLSAVMMLRHLQFNDKADRIHNAILQTIAEGKYRTADLGGKASTSEFTNA
VCDHI
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atggcgctccggaggctgctgcatgggagcgtcctgccgcgggtgtccagccgggccttt
gccccggccgtggcgcccttctccacggaggctggggagaccgtccgcgccacgctcttc
ccgggtgacggcatcgggcctgagatcgccgagtccgtcaagcaggtattcaatgttgca
ggtgtaccaatagaatgggaagaacattatgttggcacggaagttgatcccagaacagag
agtttcttgacatgggaaagcctggagtctgtgcgtagaaacaaagttggcttaaaagga
cctatggctactcctattggaaagggccatcgatcattgaatcttacattaaggaaagag
cttggtctttacgccaatgtcagaccttgcaacagcctcccaggctacaagaccagatat
gatgatgttaaccttgtgacaattcgtgaaaatactgaaggagaatatagtggtcttgag
catcaggttgtgagaggtgtcgttgaaagtttgaaaatcatcacccgccaagcaagtttg
agagtggcagagtatgctttccattatgccaaggccaattgccgcgaaagagtgtctgcg
atccacaaagctaatattatgaggaagacagatggtcttttcctcaagtgttgtcgtgaa
gtggctgagaagtaccctgaaattcaatacgaggaggtcatcatcgacaattgctgtatg
acgcttgtgaagaaacctggtcttttcgatgtattagtgatgccaaatctttatggtgac
attatcagtgatctatgtgctggtttggttgggggtttgggcctaacaccaagttgcaat
attggtgaaggtggcatttgtctggcagaagctgttcatggttctgctcctgatattgct
ggcaagaacctcgcgaacccgactgctcttatgctgagtgctgtaatgatgttgcgccac
ttgcaattcaatgacaaagcggaccggatccacaatgccatcctccagaccattgcagag
ggaaagtacaggactgctgatcttggcggaaaggcatcaacatcagaattcacaaacgct
gtctgcgatcacatctga
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