Panicum virgatum (switchgrass): 120673501
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Entry
120673501 CDS
T07260
Name
(RefSeq) presenilin-like protein At1g08700
KO
K04505
presenilin 1 [EC:3.4.23.-]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pvir01002
]
120673501
Peptidases and inhibitors [BR:
pvir01002
]
Aspartic peptidases
Family A22: presenilin family
120673501
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Motif
Pfam:
Presenilin
Motif
Other DBs
NCBI-GeneID:
120673501
NCBI-ProteinID:
XP_039810284
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Position
5N:complement(15449727..15452962)
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AA seq
481 aa
AA seq
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MDPSAASPAPEPAAEDPQSASSVLDSLGAEVLAVMSPVSICMALVVLLISLLSPPSSGSA
GGSPPPVTAATLVYLESPNDTPGQKLLGALLDAAVFVALVAAVTFVLVALYYYRCTGFLK
NYMRFSAFFVIFSMGGAIAAAVLRRLAAPLDAPTAFLLLFNGAAVGVLSVFASAVPILVR
QGYMVALAVIVAAWLSRLPEWTTWIMLVALALYDLVAVLAPRGPLRMLVELASSRDDELP
ALVYESRPTVGPATSSSSYASAMGSVEMQTMTDSGRAGGSRYDRVEQDEYASHAVVEMRD
LGRGRSSIGEMNRSRGSVLQMDNLEREVPVTSAELPSDQGGNSQHAVIQIEQHEEEETAP
LVSAASTNNAASDEEHRQSSSSEPLDFEMFESTRGIKLGLGDFVFYSVLVGRAAMYDLMT
VYACYLAIIAGLGCTLILLSICRHALPALPISIMLGVTFYFLTRLLMEPFVVGASTNLVM
F
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggatccgtccgccgcctcaccggcgccggagcccgccgcggaggatccgcaaagcgcc
tcctccgtgctcgacagcctcggcgcggaggttctggcggtcatgtccccggtctcaatc
tgcatggccctcgtcgtgcttctcatctccctcctctcgccgccgtcctccgggtccgcg
gggggctcgcctccgccagtcaccgcggcgacgctcgtctacctcgagtcccccaacgac
accccgggccagaagctcctcggcgcgcttctcgatgccgcggtcttcgtcgccctcgtc
gccgccgtcactttcgtcctcgtcgcgctctactactaccgctgcacgggcttcctcaag
aattacatgcgcttctccgccttcttcgtcatcttctccatgggcggcgccatcgccgcc
gcggtgctccgccgcctcgcggccccgctcgacgcgcccaccgcgttcctgctcctcttc
aacggcgccgcggtcggcgtcctctctgtcttcgcgtccgccgtccccatcctcgtccgc
caggggtatatggtcgcgctcgccgtcatcgtcgccgcctggctctccaggcttcccgaa
tggaccacatggatcatgctcgtcgccctcgccctgtacgacctcgtcgccgtgctcgcg
ccgcggggaccactcaggatgcttgtggagctggcctcctccagggatgacgagctccca
gcgctcgtctacgagtcccggcctacagtcggcccggcgacaagctcttcctcttatgct
tcagccatggggtcggtggagatgcaaaccatgacagattctggtcgggctggtggcagc
cggtatgaccgggtggagcaggatgaatatgccagccatgctgttgtggagatgagggat
cttggaagaggccgatcaagcattggtgagatgaacagatcaagaggttctgtgcttcaa
atggataaccttgaaagggaggttccagtgacttcagcagagctgccatcagatcagggt
gggaattcacagcatgctgtcattcaaattgaacagcatgaggaagaagagacagcgcct
ctggtgtcggcagcatctaccaacaatgcagcttcagatgaggagcataggcaaagttca
tcctcggagcctctggattttgagatgtttgaatctaccaggggcatcaagctgggcctt
ggtgattttgttttctacagtgtgcttgttgggagagctgctatgtatgatctgatgacg
gtgtatgcatgctaccttgccatcattgctggacttggctgcacccttatcttgctgtcg
atatgccggcacgcactgcctgcactcccgatatctattatgctcggagtgacattctac
ttcttgacgcggttgctgatggagccatttgtggttggtgcctcaacaaacttggtgatg
ttctga
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