KEGG   Panicum virgatum (switchgrass): 120673534
Entry
120673534         CDS       T07260                                 
Name
(RefSeq) protoporphyrinogen oxidase, chloroplastic-like
  KO
K00231  protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15]
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir00860  Porphyrin metabolism
pvir01100  Metabolic pathways
pvir01110  Biosynthesis of secondary metabolites
pvir01240  Biosynthesis of cofactors
Module
pvir_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00860 Porphyrin metabolism
    120673534
Enzymes [BR:pvir01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.3  With oxygen as acceptor
    1.3.3.4  protoporphyrinogen oxidase
     120673534
    1.3.3.15  coproporphyrinogen III oxidase (coproporphyrin-forming)
     120673534
SSDB
Motif
Pfam: Amino_oxidase NAD_binding_8 DAO Thi4 FAD_oxidored FAD_binding_3 FAD_binding_2 NAD_binding_9 Pyr_redox_2
Other DBs
NCBI-GeneID: 120673534
NCBI-ProteinID: XP_039810339
LinkDB
Position
5N:complement(15959001..15966804)
AA seq 537 aa
MVAAAAAMATAASAGVPPLSGPRGPARHRSRGVIVRCAAVAGGAAEAPASAGARASADCV
VVGGGISGLCTAQALATKHGIGNVLVTEARARPGGNITTVERPEEGYLWEEGPNSFQPSD
PVLTMAVDSGLKDDLVFGDPNAPRFVLWEGKLRPVPSKPADLPFFDLMSIPGKLRAGFGA
LGIRPPPPGREESVEEFVRRNLGAEVFERLIEPFCSGVYAGDPSKLSMKAAFGKVWRLEE
AGGSIIGGTIKTIQERGNNPKPPRDPRLPKPKGQTVASFRKGLAMLPNAITSSLGSKVKL
SWKLTSITKSDGKGYVLVYETPEGVVSVQAKSVIMTIPSYVASDILRPLSSDAADALSRF
YYPPVAAVTISYPKEAIRKEYLIDGELQGFGQLHPRSQGVETLGTIYSSSLFPNRAPAGR
VLLLNYIGGATNTGIVSKSESELVEAVDRDLRKMLINPRAVDPLVLGVRVWPQAIPQFLV
GHLDLLEAAKSALDRGGYDGLFLGGNYVAGVALGRCVEGAYESASQISDFLTKYAYK
NT seq 1614 nt   +upstreamnt  +downstreamnt
atggtcgccgccgccgccgccatggccaccgccgcgtccgctggcgtgcctccactcagc
gggccccgcggccccgcgcggcaccgcagccgcggcgtcatcgtgcgctgcgccgcggtg
gcgggcggcgcggccgaggcgccggcctccgcgggcgcgcgggcgtccgcggactgcgtc
gtggtgggcggcggcatcagcggcctctgcaccgcgcaggcgctggccacgaagcacggc
atcgggaacgtgctcgtcacggaggcccgcgcccgccccggcggcaacatcaccaccgtc
gagcgccccgaggaagggtacctctgggaggaggggcccaacagcttccagccctccgac
cccgtcctcaccatggccgtggacagcgggctcaaggacgacttggtgtttggggacccg
aacgcgccgcggttcgtgttgtgggaggggaagctgaggcccgtgccatccaagcccgcc
gacctcccgttcttcgacctcatgagcatccctggcaagctcagggctggctttggggcg
ctcggcatcagaccgccgcctccaggccgtgaggagtcagtggaggagttcgtgcgccgc
aacctcggggctgaagtctttgagcgcctcattgagcctttctgctcaggtgtctatgct
ggtgatccttccaagctcagtatgaaagctgcatttgggaaggtgtggcgcctggaagag
gctggaggtagtatcattggtggaaccatcaagacaattcaggagaggggcaacaatcct
aaaccaccgagggatccccgccttccgaagccaaaggggcaaacagttgcatctttcagg
aagggtctcgccatgcttccaaatgccattacatccagcttgggtagtaaagtcaagctt
tcctggaaactcacgagcattacaaaatcagatggcaagggatatgtattggtgtatgaa
acacctgaaggggttgtttcagtgcaggctaaaagtgttatcatgacgattccatcatat
gttgctagtgacatcttgcgtccactttcaagcgatgctgcagatgccctttcaagattc
tattatccaccagttgctgctgtaactatttcgtatccaaaggaagctattaggaaagaa
tacctaattgatggggagcttcaaggatttgggcagttgcatccacgtagtcaaggagtt
gagacattaggaacaatatacagctcatcactctttccaaatcgtgctcctgctggaagg
gtgttactcctaaactacataggaggtgctacaaacacaggaattgtttccaagagtgaa
agtgagctggtagaagcagttgaccgtgacctcaggaaaatgctaatcaaccctagagca
gtggaccctttagtcctcggtgtccgagtgtggccacaagccatacctcagttcctggta
ggacatcttgatcttctggaggctgcaaaatctgccctggaccgaggtggctacgatggg
ctgttcctcggaggaaactatgtagcaggagttgccctgggccgatgcgtggagggtgcc
tatgagagcgcctcgcaaatatctgacttcctgaccaagtacgcttacaagtga

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