Panicum virgatum (switchgrass): 120673659
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Entry
120673659 CDS
T07260
Name
(RefSeq) probable sodium/metabolite cotransporter BASS2, chloroplastic
KO
K03453
bile acid:Na+ symporter, BASS family
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99977 Transport
120673659
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Motif
Pfam:
SBF
SBF_like
MotA_ExbB
Motif
Other DBs
NCBI-GeneID:
120673659
NCBI-ProteinID:
XP_039810543
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Position
5N:complement(48816848..48823559)
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AA seq
425 aa
AA seq
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MAAPSATSPMASVSRVLRPRPACPAPRLGRGLGIACSLPSHGGRSETRGLGLPVASALSA
TAAPVLRSRQILCKAEANVSSNLPESLPVAVKYEKTIELESPPAELSQYEKIVELLTTLF
PVWVMLGTVIGIYKPAMVTWLSTDLFTVLLGFLMLSMGLTLTFEDFRRCLRNPWTVGVGF
LAQYLIKPLLGLAIASTLNLSAPLATGLILVSCCPGGQASNVATYISKGNVALSVLMTTC
STIGAIIMTPLLTKLLAGQLVPVDAAGLAISTFQVVLLPTVLGVLAHEYFPKFTDRIISV
TPLIGVLLTTLLCASPIGQVADVLKTQGAQLIIPVALLHAAAFGIGYFLSRLCTFGESTS
RTVSIECGMQSSALGFLLAQKHFTNPLVAVPSAVSVVAMALGGSALAVYWRNIGLPANDK
DDFKE
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgccgtccgccaccagccccatggcctccgtctcccgggtcctccgcccgcgg
cccgcctgcccggctccccgtctagggcgcgggttgggaatcgcgtgctcgttgccgagt
catgggggaaggagcgagacgcgcgggttgggattgcccgtcgcgtctgcactatctgct
actgccgctccggttctgaggagccgccaaattttgtgcaaggctgaagctaatgtatcc
agtaatcttccggagagcttgcctgtggcagttaagtatgaaaaaactatcgagctggag
agcccgcctgccgaacttagccagtatgaaaaaattgtcgagctgcttaccactcttttc
cctgtctgggttatgctaggaactgttattggcatctacaagccagctatggttacctgg
ttgtcgaccgatcttttcactgttttgttaggattcctaatgctctccatgggattaaca
ttgacatttgaagattttaggagatgcttgaggaacccatggacagttggtgtgggattt
cttgcacagtatttgatcaaacctttgctaggattagctattgcctcgaccttgaactta
tctgctcctcttgcaaccggccttattttggtctcatgttgccctggtggacaagcatca
aatgttgcaacttacatatcaaaggggaatgttgcgctttcagttcttatgaccacctgt
tcaactattggtgctattataatgacacccctcctgactaaactccttgcgggtcaacta
gttcctgttgatgcagcaggattggccatcagtactttccaggttgttttattgccgact
gttcttggagtgttggcgcatgaatatttccccaagttcactgatcgcattatctccgta
acgcctctgattggtgtcctgctcaccactttgctttgtgcgagtcctattgggcaagtg
gcagatgtgttgaaaactcaaggtgctcaacttattatccctgtcgctctgctacatgct
gctgcatttggtattggttactttttatccagactatgtacctttggagaatcgacttct
aggaccgtctcaattgaatgcggcatgcagagttctgcgcttggatttttacttgcccaa
aagcacttcacaaatcctcttgttgctgttccttctgctgtcagcgttgtggccatggcc
cttggagggagtgctcttgcagtttactggagaaacatagggcttcctgcaaatgacaag
gacgacttcaaggagtga
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