Panicum virgatum (switchgrass): 120673681
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Entry
120673681 CDS
T07260
Name
(RefSeq) la-related protein 6A-like
KO
K15191
La-related protein 7
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvir03021
]
120673681
Transcription machinery [BR:
pvir03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
7SK RNP complex
120673681
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GFIT
Motif
Pfam:
La
RRM_1
Motif
Other DBs
NCBI-GeneID:
120673681
NCBI-ProteinID:
XP_039810577
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Position
5N:complement(57448143..57452819)
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AA seq
413 aa
AA seq
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MDGQAPPPLDAVAREPLAVAAELPPPPPLEVEDALTPGMDGHAPPLDGVSPGPLTVSDEL
PPPPSPTGEVEDSLPVGPDTVDAATSGVPEAGTGGVELTDELRDQIVKQVEYYFSDENLP
TDEFLLKYVKKNKKGFVPIETIASFRRMKKLVQDLSVIAAALRTSPKLVVSPDGKRVRRF
GPLPQNELKDSKKSTVLVENLPPDFSMESIQEKFGTVGKVVKITINDPELVKEDSTAKKP
AFILSSKVHALVEYEAVEAAGKAVTTLSDESNWRTGMKVRLLSKASGKHSKSSKENQDTF
SKKNIQNEHGKEDQQTTLEKNSVGDSVEGTKDKENLNSSFTTESEQQHQKPNPKGGRKGQ
YKGHGQIQQNTNKQGSESLNKPIPGPGMPDGTKGFTMGRGRPLPLQKSEMAEE
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggacggccaggctccacctcctctcgacgctgtagcgcgcgagccactcgcagtcgcc
gccgagctcccgccgccgccgcctctcgaggtggaggacgccctaacccccggtatggac
ggccatgctccgcctcttgacggcgtctcgccaggtcctctcaccgtgtccgacgagctg
cctccgcctccttcgccgacgggcgaggtggaggactccctgcccgtcgggcccgacacc
gtcgacgccgccacttcgggtgtgcccgaggctggcacaggtggcgtcgagctcaccgac
gagctccgtgatcagatagtcaagcaggtggagtactatttcagtgatgagaatcttcct
accgacgagttcctgttgaaatatgtgaagaagaacaaaaagggctttgttcctatcgag
actatcgcatcatttagaaggatgaagaaactcgttcaggatctctcagtaattgcagct
gcactcaggacatcaccaaagctggttgtaagtccagatgggaaaagggtcaggaggttt
ggtccattgccacagaatgaactgaaagattcaaagaaaagcacagttttggtggaaaat
ctacctccagatttctccatggagagtatacaggaaaagttcggcacagttggcaaagtt
gtgaaaataacaattaatgatccagaattagtgaaagaagattcaactgctaagaagccg
gccttcattttaagtagtaaggttcatgcccttgttgagtatgaagcagttgaggccgct
gggaaggctgttactaccttaagtgatgagagcaactggagaactgggatgaaagtcagg
cttctgtcaaaggcatcaggaaagcatagcaaatcgtcaaaagaaaatcaggatacattt
tccaaaaagaacattcagaatgagcatggaaaagaagaccagcaaacaaccttggaaaag
aacagcgtcggtgattcagtggagggtactaaggacaaggaaaatttgaactcttctttc
accactgagagtgagcagcaacaccaaaagccgaatcctaaaggagggcgaaaaggccag
tacaaaggtcatggtcagattcagcaaaatacaaacaaacaaggttctgagtcattaaac
aagcctattcctggaccaggaatgccagatggaacaaagggcttcaccatggggcgtggt
agacctcttccactacagaaatctgaaatggctgaagagtag
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