Panicum virgatum (switchgrass): 120673683
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Entry
120673683 CDS
T07260
Name
(RefSeq) protein IWS1 homolog 1-like
KO
K17498
transcription factor SPN1
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvir03021
]
120673683
Transcription machinery [BR:
pvir03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
120673683
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med26
Motif
Other DBs
NCBI-GeneID:
120673683
NCBI-ProteinID:
XP_039810579
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Position
5N:complement(7890209..7894998)
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AA seq
513 aa
AA seq
DB search
MDDNFFDEDGEALMDPDARDPSPEPQPYEDLDDDLSDDWTRERSPTPAHGDDGGTGSSKP
RKRLLKKGGGGGGGMPGDDGLEDFGLEDADADPAAEAKKRKGSSALRDLARGGAGKEKKE
KKRRREDDGRGRDSGMAREKRGSGGGRGSGGGEDQDDGEREIQELWDTIAGGDSEDDQEG
VRTVDDDNFIDDTGVDPADRYGSDNERHSPGRYAQAEEGEEDDEIERLFKGNKKKKKNDR
PRADIGLIVEQFIAEFEVAAEEDANLNRQSKPAINKLMKLPLLLDVLSKKNLQQEFLDHG
VLTLLKNWLEPLPDGSMPNMNIRSAVLKLLTDFPIDLEQYDRREQLKKSGLGKVIMFLSK
SDEETTANRKLAKELVDKWSRPIFNKSTRFEDMRRYDDERAPYRRPQMKKPSSSSSGMES
RDDDLDADFSQRKSGQSSSRQHASRPEASPLDFVIRPQSKIDPEHIRARAKQAVQDQRRL
KMNKKLQQLKAPKKKNLQASKLSVEGRGMIKYL
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggacgacaacttcttcgacgaggacggcgaggcgctcatggaccccgacgcgcgggac
ccgtcccccgagccgcagccctacgaagacctcgacgacgacctgagcgacgactggacc
cgggagcgttccccgacccccgcccacggcgacgacggcgggacggggtcctccaagccc
cgcaagcggctcctcaagaagggcggcggtggcggtggcggcatgcccggcgacgacggg
ctggaggactttgggttggaggacgcggacgcggaccccgcggcggaggcgaagaagagg
aagggctcgtcggcgctgagggacctcgcgaggggcggggcgggcaaggagaagaaggag
aagaagaggaggagggaggacgacgggagggggagggacagtgggatggccagggagaag
cgggggtcaggaggagggaggggctctggcggtggggaggaccaggatgatggagaaagg
gagatccaggagctctgggataccattgccggtggtgactcagaggatgaccaagaaggc
gttagaactgtagatgatgacaatttcatcgatgacactggggttgatccagctgatcgt
tatggcagtgataatgagcggcattctcctggacgttatgcacaggcagaggagggtgag
gaggatgacgaaattgagcgactcttcaagggtaataaaaagaagaagaagaatgatcgc
ccacgtgcagatattggtcttatagtggaacaattcattgctgagtttgaggtagcagct
gaagaagatgcgaacttgaataggcagtcaaaaccagccattaacaaacttatgaagctt
ccactcctcctagatgttctttccaagaagaatcttcagcaggaatttcttgatcatgga
gttctcactcttctaaaaaattggctcgagccattgccagatggaagcatgccaaacatg
aatattcgatctgctgtacttaaattattaactgattttccaattgatttggagcaatat
gacagaagagagcagcttaagaaaagtgggctgggaaaggtcattatgtttttgtccaaa
tctgatgaagagactactgcaaataggaaactggctaaggagttggttgacaaatggagt
cgaccaatattcaacaagagcacgagatttgaggatatgaggagatatgatgatgaaaga
gcgccttacaggcggccacaaatgaagaagccttcgtcaagtagctctggaatggaatct
agagacgatgatcttgatgctgacttctcgcaacgcaagtctgggcaaagtagttcaagg
cagcatgcttcaaggccagaagcctcacctttggactttgtcattcgtccacagtccaaa
attgatcctgagcatataagggctcgtgctaagcaggctgtccaagaccagcgcaggctg
aagatgaacaagaaattgcagcagctgaaagcgcccaagaagaaaaaccttcaggcgtca
aagctcagtgtggaaggccgtgggatgatcaaatacctgtag
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