Panicum virgatum (switchgrass): 120673688
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Entry
120673688 CDS
T07260
Name
(RefSeq) probable calcium-binding protein CML12
KO
K13448
calcium-binding protein CML
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
120673688
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GFIT
Motif
Pfam:
EF-hand_1
EF-hand_7
EF-hand_6
EF-hand_5
EF-hand_8
AIF-1
EF-hand_9
Dockerin_1
SPARC_Ca_bdg
DUF4224
Motif
Other DBs
NCBI-GeneID:
120673688
NCBI-ProteinID:
XP_039810585
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Position
5N:complement(44435177..44436383)
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AA seq
294 aa
AA seq
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MSCHFSRRKYNTQSLSQHSSTPNCGQVSNPGRKPSNLSAPHSWGETQQQTNSNCTSRRPP
KRRSYPSCRQETRNGMQSFRRAREGSAAAQQRDAMPAAGPRPKRSASMPFHGAGAAKGRD
PSPAPAAGGRARLRDEQLRQLRELFLRFDLDRDGSLTLLELAALLRSLGLRPAAGDEIHA
LIAAMDADGNGTVEFDELASSLAPLLLGPCRPAVAVDQAQLAEAFRAFDRDGNGFISAAE
LARSMARLGHPICYAELTDMMREADTDGDGVISFQEFTAIMAKSAVDFLGLAAL
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgagttgtcacttttcacggaggaaatacaatacccaatctctgtcccaacacagttca
acgccaaactgtggacaagtttcgaacccagggaggaaaccatccaatttgagcgcgccc
cacagctggggcgaaacgcagcagcaaacaaatagcaactgcacaagccggcgcccccca
aaacggcgatcatatccatcctgtcgccaggagacacgcaacggcatgcagagcttccgc
cgcgcccgggaaggcagcgcggccgcccagcagcgggacgccatgcccgccgccggcccc
cgccccaagcgctcggcgtccatgcccttccacggcgccggcgccgcaaagggccgggac
ccctccccggccccggcggccggcgggcgcgcgcggctccgcgacgagcagctccgccag
ctccgcgagctcttcctgcgcttcgacctggaccgcgacgggagcctcaccttgctggag
ctcgcggcgctgctccgctccctgggcctccgccccgccgccggggacgagatccacgcg
ctcatcgccgccatggacgccgacggcaacggcaccgtggagttcgacgagctcgcctcc
tccctcgcgccgctgctcctggggccctgccgccccgccgtcgccgtagaccaggcgcag
ctcgccgaggccttccgcgccttcgaccgcgacggcaacggcttcatctccgccgccgag
ctcgcgcgctccatggcgcggctgggccaccccatctgctacgccgagctcaccgacatg
atgcgcgaggccgacaccgacggcgacggcgtcatcagcttccaggagttcaccgccatc
atggccaagtccgccgtcgacttcctcggcctcgccgccttgtga
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