Panicum virgatum (switchgrass): 120673721
Help
Entry
120673721 CDS
T07260
Name
(RefSeq) transcription factor JAMYB-like
KO
K09422
transcription factor MYB, plant
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120673721
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
120673721
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
120673721
NCBI-ProteinID:
XP_039810639
LinkDB
All DBs
Position
5N:17791605..17792970
Genome browser
AA seq
302 aa
AA seq
DB search
MEMDAQWMSPSGGSISLPSSAAAAAAELRRGPWTAEEDALLAGYVAAHGEGRWNELTLAA
GLRRTGKSCRLRWLNYLRPGVRRGGFTPREQLLILDLHSRWGNRWSKIAAHLPGRTDNEV
KNYWRTRVQKHAKQLGCDVGSGRFHDAMRNLWMPRLLERIHADESAAAGDASHYFHAASP
AHAPPSQPAYPNAAAPTSSCARATSPDAASCVTGSPSPWEASPAAQFQTSSPSMPAWSTE
QCQNGCSSATSGGDMFDESWSELLARANHDDADSAGLPGFGLLGETGDSLWSLDDIWQQP
LC
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atggagatggacgcgcagtggatgtctcctagcggcggcagcatcagcttgccgtcgtcc
gcggcggcggcggcggcggagctgcggcgggggccgtggacggcggaggaggacgcgctg
ctggcgggctacgtggcggcgcacggggagggccgctggaacgagctgacgctcgccgcg
gggctgcgccgcaccggcaagagctgccgcctccggtggctcaactacctccgccccggg
gtgcgccgcggcggcttcaccccgcgggagcagctgctcatcctcgacctccactcccgc
tggggcaaccgctggtccaagatcgccgcgcacctgccgggccgcaccgacaacgaggtc
aagaactactggcgcacgcgggtgcagaagcacgccaagcagctcggctgcgacgtcggc
agcggccgcttccacgacgccatgaggaacctctggatgccgcgcctgctcgagcggatc
cacgccgacgagtccgccgccgctggtgacgcttcgcactacttccacgccgcgagccca
gcgcacgcgccgccctcccagccggcgtaccccaacgctgcagcacccaccagcagctgc
gcgcgcgcaacttcaccggacgccgcgtcgtgcgtgaccgggtcgccgtcgccatgggag
gcgtcgccggcagcgcagttccagacaagcagtccgagcatgccggcttggtccaccgag
cagtgccaaaacggctgctcgagcgcgacgagcggtggtgacatgttcgacgagagctgg
tcggagcttcttgcgcgcgccaaccacgacgacgcggattccgccggactgccgggcttc
ggattattgggagaaactggagacagtttgtggagtttggacgatatctggcagcaaccg
ctatgctga
DBGET
integrated database retrieval system
