Panicum virgatum (switchgrass): 120673733
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Entry
120673733 CDS
T07260
Name
(RefSeq) acyl-CoA-binding domain-containing protein 4-like isoform X1
KO
K20285
Rab9 effector protein with kelch motifs
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120673733
Membrane trafficking [BR:
pvir04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
120673733
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
Kelch_4
Kelch_3
Kelch_1
Beta-prop_ATRN-LZTR1
Kelch_5
Kelch_6
Kelch_2
NANM
Motif
Other DBs
NCBI-GeneID:
120673733
NCBI-ProteinID:
XP_039810658
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All DBs
Position
5N:18012902..18017190
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AA seq
639 aa
AA seq
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MERRRKAMWLYPKVVGFNPPERWGHSACFFEGVVYVFGGCCGGLHFSDVLTLNVETMAWS
SMATTGQRPGTRDSHGAALVGHRMLVFGGTNGGKKVNDLHVLDLRTGEWTRPQCKGAPPS
PRESHTVTVVGGDRLVVFGGSGEGESNYLSDVHVLDVPTMTWSTPEVKGDYGPAPRDSHG
AVAVGGRLFVYGGDCGDRYHSEVDVLDVDTMAWSRFPVKGASPGVRAGHAAISVGSKVYI
IGGVGDKQYYSDVWVLDVANRSWSQLEVCGQQPQGRFSHTAVAMNTDIAIYGGCGEDERP
LNELLILQLGSEHPNGRYNISMCKVLSNHWSQEKRKFLRSQTQKDASVSNGEMVQKPREA
EIEQRNPFLRGLENGHVKRRKTGEAHPNEPESEQEEHSLSLSQHSSPSQSDQEQNGVHKL
SASPNTSISALQPFVRLNTNGTLRSPGPGGANGTLRAPGPGGANCTLRAPGPGGVSPRPL
KTDQLLRTIAPQHRQEVQFLSSDHKPQPRPPGPPLIGAEVHGTIDGAFDSGYLMTAVVNG
QLFRGVLFAPGPGVTAPRPAVHHQILSSSAVPPQQRPLLAHAIPVHARPVPQVTGFVLPD
CAHHARQGFPAKAVKSEPERGSSDLHDVVLTLGGPGGGK
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggagcggcggcggaaggcaatgtggctctaccccaaggtggtcggcttcaacccgccg
gagaggtggggccactccgcctgcttcttcgagggggtcgtctacgtcttcgggggatgc
tgcggcggcctgcacttcagcgacgtgctgacgctgaacgtggagaccatggcgtggagc
tccatggccacgacggggcagcgcccgggcacgcgggacagccacggcgccgccctggtg
ggccaccggatgctcgtcttcgggggcaccaacggcggcaagaaggtgaacgacctccac
gtgctggacctgcgcactggggagtggacccgcccgcagtgcaagggggcgcctccgtcg
ccgcgggagagccacaccgtcaccgtcgtcggaggcgaccgcctcgtcgtcttcggcggg
agcggcgagggggagagcaactacctcagcgacgtgcacgtgctggacgtgcccaccatg
acgtggtccacgccggaggtcaagggtgactacgggccggcgcccagggacagccacggc
gccgtggccgtcggcggcaggctcttcgtctacggcggggactgcggcgaccggtaccat
agcgaggtggacgtgctcgacgtcgacaccatggcgtggtcaaggtttccagtaaaggga
gcatcgcctggcgtcagggcaggtcatgcagctatcagcgttggttctaaggtctatatt
attggaggagttggtgataaacaatactacagtgatgtgtgggttcttgatgtcgcaaac
cgttcgtggagtcagcttgaagtatgcgggcagcaaccacagggacggttttctcacaca
gcggtagctatgaatactgacattgcaatctatggagggtgcggtgaagatgagcgtccc
ctgaatgagcttctcattctgcaattgggctccgagcatccaaatggccgctacaacatt
tcaatgtgcaaggttctgagcaaccattggagccaggagaagagaaaatttctgagatca
caaactcagaaagatgcaagtgtgagcaatggagaaatggttcagaaaccccgagaagca
gaaattgagcaaaggaacccattcctgcgtggccttgagaatggccatgtgaaacgaaga
aaaactggtgaagctcatccaaatgagcctgagtcagagcaagaggagcactcactgtct
ctttcccaacattcttcaccgtcgcagtctgaccaggagcagaatggagtacacaagctt
tcagcctctcctaacacatcaatttcagccctgcaaccattcgtccgcctcaataccaat
ggcacgctgaggtctccaggacctggaggtgccaatggcacgctgagggctcctggacca
ggaggtgccaattgcacgctgagggctcctggacctggaggtgtttcgccgaggcctctg
aagactgatcagcttctccggaccattgcaccacaacatcggcaggaagtgcagttcctt
tcatctgatcacaaaccacagccccggcctcctggtccacccctgattggcgcagaggtt
catgggacaattgacggagcattcgactcagggtacctcatgaccgctgtggtgaatggt
cagctcttcagaggcgtactctttgctcctggacctggagtgacggctccgagaccggcg
gtgcaccaccaaatcctgtcgagctcggccgtgcctccccagcagcggccactgctggct
cacgccatcccggtccacgcccggccggtgccacaggtgacgggcttcgtgctgcctgac
tgcgcccaccacgcgcggcaagggttcccggcgaaggccgtcaagtctgagccagagcgg
ggcagcagcgacctgcacgacgtggtgctcacactgggagggcctggagggggcaagtga
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