Panicum virgatum (switchgrass): 120673750
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Entry
120673750 CDS
T07260
Name
(RefSeq) cation-chloride cotransporter 2-like
KO
K14427
solute carrier family 12 (potassium/chloride transporter), member 4/6
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120673750
Transporters [BR:
pvir02000
]
Solute carrier family (SLC)
SLC12: Electroneutral cation-coupled Cl cotransporter
120673750
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Gene cluster
GFIT
Motif
Pfam:
AA_permease
SLC12
AA_permease_2
Na_Ala_symp
NAD_binding_6
Motif
Other DBs
NCBI-GeneID:
120673750
NCBI-ProteinID:
XP_039810678
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All DBs
Position
5N:complement(18321124..18332637)
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AA seq
975 aa
AA seq
DB search
MERGGIGNDDEEAAAPKRPQQRYHAVESQDHAVVQMTAMEPGSSAAAPRPMKPGTNLSID
PRMKMTSSNGHAVPNVSQSDSKLELFGFDSLVNILGLKSMAGEQPQATTSPRDGEDVGIT
IGCPKETEPKLGTMMGVFVPCLQNILGIIYYIRFTWIVGMGGIWQSLVLVAFCGACTFLT
GLSLSAIATNGAMKGGGPYYLIGRALGPEVGISIGLCFFLGNAVAGAMYVLGAVETFLDA
VPAAGFFQDATTVVGGTTVSTPSLHDLQIYGVVITILLCFIVFGGVKIINKVAPAFLIPV
LFSILCIFIGVFSAPGSDAPKRITGLNMTTLSDNWSSDYQPTNNAGVPDSKGSIYWDFNA
LLGLFFPAVTGIMAGSNRSASLKDTQRSIPVGTLNATLSTTGMYFISVFLFGALATRDEL
LTNRLLAATVAWPGPAVIYIGIILSTLGAALQSMTGAPRLLAAIANDDILPVLNCFKAYE
GSEPHVATLFTSFICIACVVIGNLDLITPTITMFFLMCYAGVNLSCFLLDLLDAPSWRPR
WKLHHWSLSLIGASQCIVIMFMISWTFTVVSLALASLIYYYVSLKGKAGDWGDGFKSAYF
QLALRSLRSMGANQVHPKNWYPIPLIFCRPWGKLPENIPCHPKLADFANCMKKKGRGMSI
FFSIIDGDYHESAEDAKTACHQLSAYIDYKRCEGVAEIIVARSMSDGFRSIVQIMGLGNL
KPNIVVMRYPEIWRRENLTQIPSTFISIINDCIIANKAVVIVKGLDEWPNEYQRQYGTID
LYWIVRDGGLMLLLSQLLLTKESFESCKIQVFCIAEEDTEAEELKADVKKFLYDLRMQAE
VIVVTMKSMEARAELSASAKKDPEEEHASAQRRIKAYLSEMKETAQREGRPLMEGGRQVV
VNEEKVEKFLYTMLKLNTTILKYSRMAVVVLVSLPPPPLNHPAYCYMEYMDLLVVNIPRM
LIVRGYRRDVVTLFT
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atggagcgcggtgggatcgggaacgacgatgaggaggctgcagctccgaagcgtccgcag
cagaggtaccatgctgtggagtcgcaagaccacgctgttgtgcagatgacggccatggag
cctgggtcgtccgcggccgcgcccaggcccatgaagcctggtactaatctaagtattgac
ccaagaatgaaaatgacttcatcaaatggccatgctgtacctaatgtatctcaaagtgat
tcaaagctcgagctttttggttttgactctctagtcaatattttgggactcaagagtatg
gcaggagaacaaccccaggcaacaactagccctagagatggtgaggatgtagggattact
attggatgccctaaggaaactgagccaaaacttggtaccatgatgggtgtatttgttcca
tgtctacagaacatcttgggaataatatattatattcgttttacatggattgtgggtatg
ggaggcatatggcagtcacttgttttagttgcattctgcggtgcatgcacatttttaact
ggattatcattaagtgcaattgcgacaaatggagcaatgaagggtggtggcccttattat
ctaattggtcgtgcacttggtccagaagttggaatcagtattggattgtgcttcttcctt
ggaaatgcagttgctggagctatgtatgtgttgggagctgtagaaacatttctagatgct
gttccagcagctggattttttcaagatgctacaacagtagttggtggaacaactgtatca
acacctagcttgcatgacctccaaatctatggtgttgtcattaccatattgctatgcttt
attgtatttgggggtgtcaaaattatcaacaaggtcgcacctgctttcttaataccagtc
ctcttctcaatactctgcatttttattggcgtcttcagtgcaccagggtcagatgctcca
aagaggatcactgggttgaatatgactacactttctgacaactggagttcagactaccaa
cctacaaacaatgctggagtccctgactcaaaagggtcgatatattgggattttaatgca
ttgttagggctctttttcccggctgttactggaatcatggctggttcaaaccgttccgct
tcgctaaaggacacgcaacgttccataccagttgggacattaaatgctaccctttcaaca
actgggatgtatttcatttctgtcttcctatttggagctttggctacaagagatgagctt
ctaactaacaggcttcttgctgcaacagttgcttggcctggtcctgcagtaatttacatt
ggtattattctgtccactttaggtgcagcactacagagtatgactggggctccacggtta
cttgcagcaatagcaaatgatgacatccttcctgttcttaattgttttaaggcttatgaa
ggatctgagcctcatgtggcaactctatttacaagcttcatatgtattgcttgtgttgtg
atcgggaacttggatctaatcacacctactatcactatgtttttccttatgtgttatgct
ggtgtgaacctgtcatgctttcttctagacctccttgatgctcctagttggcgccctcga
tggaaattacatcactggagcctttctttgataggtgcatcccaatgtattgttatcatg
tttatgatctcatggacttttaccgtggtctcgcttgccctcgcaagcctcatctactac
tatgtcagcttaaaaggaaaggctggtgattggggagatggattcaaaagtgcatacttc
caattggctctgcgaagcctccgatcaatgggagcaaatcaagtacatccgaaaaattgg
taccccattcctctcatattttgccggccttggggtaaacttccagaaaatatcccatgc
catccaaaacttgcagattttgccaattgcatgaagaaaaagggtcgtggcatgtcaatt
ttcttctcaatcattgatggtgactaccacgaatcagccgaggatgcaaagacagcctgc
catcaacttagcgcctatattgactataagcgttgtgagggtgtcgcggagatcatcgta
gcacgctcaatgtctgatggttttcgtagcattgttcagataatgggcctaggcaacctg
aagccaaatattgttgtgatgcgttaccctgagatttggcgtcgtgaaaatctgacgcaa
ataccgtcgacatttatcagcatcataaatgattgtattattgctaacaaggcagtcgtc
attgtgaaaggactagatgagtggcctaatgagtaccagagacagtatggaaccattgac
ttatactggattgtgagggatggagggctaatgctattgctatctcagctgctacttacc
aaagagagctttgaaagctgtaagattcaggtcttctgcatagctgaagaggacacagaa
gctgaggagctaaaagctgatgtgaaaaagtttctgtatgatcttcgtatgcaagctgag
gttatagttgtgacaatgaagtcaatggaagcacgtgccgagctcagtgctagtgctaag
aaggatcctgaagaagaacatgccagcgctcagcgtagaatcaaagcatacctttctgag
atgaaggagactgcacaaagagaagggcggccactgatggagggtggtagacaagttgtg
gttaatgaagagaaggtcgaaaagttcctctacacgatgctgaagctgaataccactatc
ctcaagtactcccggatggcagtagtggtgctggtgagcctcccaccgccgcctttgaac
cacccggcctactgttacatggaatacatggatctgcttgttgtgaacatcccacgaatg
ctgatagttaggggatacaggagggacgtcgtcacacttttcacttga
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