Panicum virgatum (switchgrass): 120673758
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Entry
120673758 CDS
T07260
Name
(RefSeq) ubiquitin fusion degradation protein 1 homolog
KO
K14016
ubiquitin fusion degradation protein 1
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120673758
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pvir03009
]
120673758
Ribosome biogenesis [BR:
pvir03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
120673758
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UFD1_N1
UFD1_N2
Motif
Other DBs
NCBI-GeneID:
120673758
NCBI-ProteinID:
XP_039810723
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All DBs
Position
1K:6475324..6479461
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AA seq
310 aa
AA seq
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MYFEGYGYRGSTFEQTYRCYPSSFIDKPQLEAGDKIIMPPSALDRLASLHIEYPMLFEVH
NAAAERTSHCGVLEFIAEEGMIYMPYWMMQNLLLQEGDMVFIKNANLPKGTYVKLQPHTT
DFLDISNPKAILEKTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVD
FAPPLDYKEPEPVKPAGPANTEPTAEAPAEEPKFIPFTGSGRRLDGKASKDKDVLASSPA
KRQANVTNSVQPSTATMSQGSSSRKTTGKLVFGSSGSRADKAPEKEAKEEPKKEEPKFSA
FTGKKYSLRG
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgtactttgagggctatggctaccgtggaagcactttcgagcagacatatcgctgctat
ccttcatctttcattgataagccacaacttgaggccggtgacaaaattattatgccgcca
tcggctcttgatcgtcttgcatctctgcatattgaatatcctatgctttttgaagtccac
aatgcggcagcagaacggacttcacattgtggtgtcctggagttcattgcagaagaaggc
atgatttacatgccatattggatgatgcaaaatcttcttctgcaagagggagatatggtg
ttcataaaaaatgccaacctccccaagggcacatatgtcaagttgcagcctcatacgaca
gactttttagatatctcaaaccccaaagcaatcttggagaaaactctgcggaacttttct
tgtctaaccacaggtgacagcattatggtagcgtataataacaagaagtactacattgat
atagtggagacaaaaccttccaatgctataagtattattgagactgattgtgaggttgac
tttgcaccaccacttgactacaaagaacctgagccagtaaaacctgctggtcctgcaaac
acggagcctactgccgaggctccagctgaagaaccaaagttcattcccttcactggttcc
ggaaggcgtctggatgggaaggcttccaaagataaagatgtgctggcctcatcccctgca
aaacgacaagctaatgtgaccaatagtgtccagccatcaacagccaccatgtcacagggc
agttcatcgcgtaagaccacaggaaagcttgtcttcggctctagtggaagtcgagctgat
aaggcacctgagaaggaagcaaaggaagaaccaaagaaagaagaaccgaaattctcggcg
tttacgggaaagaaatactcactgagaggctga
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