Panicum virgatum (switchgrass): 120673783
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Entry
120673783 CDS
T07260
Name
(RefSeq) endoglucanase 3
KO
K01179
endoglucanase [EC:
3.2.1.4
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00500
Starch and sucrose metabolism
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
120673783
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.4 cellulase
120673783
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_9
Motif
Other DBs
NCBI-GeneID:
120673783
NCBI-ProteinID:
XP_039810721
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Position
5N:complement(18830048..18832339)
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AA seq
499 aa
AA seq
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MARLLCALVLALLLARLPGDAIAGRGHHGPAAHDYRDALAKSILFFEGQRSGRLPPSQRM
SWRRDSGLKDGASATVDLVGGYHDAGDNVKFGFPMAFSMTMLAWSVVEFGGLMKAELQHA
REAVRWGADYLLKATAHPDTIYVQVGDATKDHACWERPEDMDTPRTVYKVDPGTPGSDVA
AETAAALAAASLVFRKSDPAYASRLLARAKRVFAFADRHRGSYSTGLAADVCPYYCSYSG
YQDELLWGAAWLHRATRSPAYLSYIQANGQVLGAGEADNTFGWDNKHAGARVLIAKAFLV
QRLGALREYKAHADAFVCSMVPGTPTDQTQYTRGGLLFKLSDSNMQYVTSSAFLLLTYAK
YLAFARQTVSCGGGGAVTPQRLRAIARRQVDYLLGSNPAGMSYMVGYGARYPRRVHHRAS
SLPSVAAHPGRIGCSQGFAALYAGGANPNVLVGAVVGGPDLQDRFPDQRSDHEHSEPATY
INAPLVGALAYLAHSYGQL
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcctcctctgcgcgctcgtgctggcgctcctcctcgcgcggctgcccggcgac
gccatcgccgggcgcgggcaccacggccccgccgcgcacgactacagggacgcgctcgcc
aagtccatcctcttcttcgagggccagcggtcgggcaggctgccgccgtcgcagcgcatg
tcctggcgccgggactcgggcctcaaggacggcgcctccgccacggtggacctcgtgggc
gggtaccacgacgccggcgacaacgtcaagttcgggttcccgatggcgttcagcatgacg
atgctggcgtggagcgtggtggagttcggcgggctcatgaaggccgagctgcagcacgcc
agggaggccgtccgctggggcgccgactacctgctcaaggccacggcgcacccggacacc
atctacgtccaggttggcgacgccaccaaggaccacgcgtgctgggagcggccggaggac
atggacaccccccgcaccgtgtacaaggtggaccccggcacccccggctccgacgtcgcc
gccgagacggccgccgcgctcgccgccgcctccctcgtcttccgcaagtcggacccggcc
tacgccagccgcctcctcgcccgggccaagagggtgttcgcgttcgcggacaggcaccgg
ggctcctacagcacgggcctggcggcggacgtgtgcccttactactgctcctactccggg
taccaggacgagctcctgtggggcgcggcgtggctgcaccgcgccacccggagccccgcg
tacctgagctacatccaggccaacggccaggtgctgggcgccggcgaggcggacaacacg
ttcgggtgggacaacaagcacgccggcgcccgggtcctgatcgccaaggcgttcctggtg
cagcgcctgggcgccctgcgcgagtacaaggcccacgccgacgccttcgtctgctccatg
gtgcccggcacgccgacggaccagacccagtacacccgcggcggcctgctgttcaagctc
agcgacagcaacatgcagtacgtcacctccagcgccttcctcctgctcacctacgccaag
tacctggccttcgcgaggcagacggtgagctgcggcggcggcggcgcggtgacgccgcag
cggctgcgcgccatcgcgcggcggcaggtggactacctgctggggagcaacccggcgggg
atgtcgtacatggtcgggtacggggcgcgttacccgcgtcgcgtccaccaccgcgcgtcg
tcgctgccgtcggtggcggcgcacccggggcggatcgggtgctcgcaggggttcgccgcg
ctgtacgccggcggggccaacccgaacgtgctcgtcggcgccgtcgtggggggccccgac
ctgcaggacaggttccccgaccagcgcagcgaccacgagcactcggagccggccacctac
atcaacgcgccgctcgtcggcgccctcgcgtacctcgcgcactcctacggtcagctctag
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