Panicum virgatum (switchgrass): 120673787
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Entry
120673787 CDS
T07260
Name
(RefSeq) rhamnogalacturonan I rhamnosyltransferase 1-like
KO
K23280
rhamnogalacturonan I rhamnosyltransferase [EC:
2.4.1.351
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pvir01003
]
120673787
Enzymes [BR:
pvir01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.351 rhamnogalacturonan I rhamnosyltransferase
120673787
Glycosyltransferases [BR:
pvir01003
]
Polysaccharide
Structural polysaccharide
120673787
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
O-FucT
Motif
Other DBs
NCBI-GeneID:
120673787
NCBI-ProteinID:
XP_039810726
LinkDB
All DBs
Position
5N:complement(6464305..6468164)
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AA seq
493 aa
AA seq
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MGAGGGGGRRRRAWRWAMRAAASAVLWTAVVQLASIVGLFRPRVFADCGGGGGAAGAGLA
AAAAGLAALASEDSVAAKLSPPALVPKRIYKSNGYLRVTCNGGLNQMRAGICDMVTIARH
LNLTLVVPELDKKSFWADPSDFGDIFDVDHFISSLRDELMIVKELPLKLQLRTKKRLYSM
PPVSWSNETYYLKRILPLARKHKVIHFDKSDARLANNGLPIQLQMLRCRVNFEALRFTPQ
IEALGKKLVSTLQRNGQFVVLHLRYEMDMLSFSGCTHGCSSKETEELTRMRYAYPWWKEK
EIDSEAKRLQGLCPLTPEEITLVLKALGFTKDTLIYIASGEIYGGERRLAALKAAYPKLV
RKEKILSPDELQPFQNHSTQMAALDYMVSLASNIFIPSYDGNMARVVEGHRRYMGFRKTI
VLDRKKLVELLDLFQGGALSWDEFSGAVKEAHKSRMSQPTERKIIPGQPKEEDYFYANPQ
ECLGSNGGFRDAS
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgggggccggcggcggagggggccggcggaggcgggcgtggcggtgggccatgcgggcg
gcggccagcgccgtgctgtggacagcggtcgtgcagctcgcctccatcgtcgggctgttc
cgcccgcgggtcttcgcggactgcggcggcggcggaggcgcggcgggagccggactggcc
gccgccgccgcggggctcgccgcgctcgccagcgaggacagcgtcgcggcgaagctctca
ccgccggcgctcgtgcccaagagaatttataaaagcaatggttacctacgagtgacttgc
aatggtggtctcaatcaaatgcgagctgggatatgtgatatggtgactatagcacgccat
ctaaatctaactctagtggtccctgaactggacaaaaagtctttttgggctgatccgagt
gattttggagatatttttgatgtggatcacttcattagttccctgagagatgagcttatg
atcgttaaagaactgcctttgaaactccagttaagaactaagaaaagactatactcaatg
cctcctgtcagctggtcgaatgaaacgtactacctgaagcggatattaccacttgcaagg
aagcacaaagtgatccattttgataaatcagatgctcgccttgcaaacaatggccttcca
attcagctccagatgctgcgttgccgtgtaaactttgaggctttgagattcactccacag
attgaggcccttggcaaaaaacttgtctccaccctccagagaaatgggcaatttgttgtg
cttcatttgcgctatgaaatggacatgctctccttttcaggctgcacacatggctgctct
agtaaagaaaccgaggagctcactagaatgagatacgcttatccatggtggaaagaaaag
gagatcgattctgaagcaaagaggcttcagggactttgccccctcacaccagaagaaatt
actctagttcttaaagctctaggattcacaaaagatacactgatatacattgcttctggt
gaaatttacggtggtgaaaggcgcttggctgcgctcaaggctgcataccctaaactagtg
aggaaggagaaaattttatctcctgatgaattgcagccattccagaaccattcaacgcag
atggcagcactggattacatggtttctttggcaagtaatattttcattcccagctatgat
ggaaatatggcaagggttgttgaaggtcaccgcaggtatatgggttttcgcaagaccatt
gtattggacagaaagaagctcgttgaactcttggaccttttccaaggaggtgcactatct
tgggatgaattctcaggtgcagtgaaggaggcacacaagagccgcatgagccaacctaca
gaaagaaagatcatccctgggcagcccaaggaagaggactatttctatgctaatcctcaa
gaatgccttggctccaatgggggatttagagacgcttcctga
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