Panicum virgatum (switchgrass): 120673830
Help
Entry
120673830 CDS
T07260
Name
(RefSeq) peptidyl-prolyl cis-trans isomerase CYP57-like
KO
K12737
peptidyl-prolyl cis-trans isomerase SDCCAG10 [EC:
5.2.1.8
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvir03041
]
120673830
03110 Chaperones and folding catalysts [BR:
pvir03110
]
120673830
Enzymes [BR:
pvir01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
120673830
Spliceosome [BR:
pvir03041
]
Complex C
Other components
PPlases
120673830
Chaperones and folding catalysts [BR:
pvir03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
120673830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Motif
Other DBs
NCBI-GeneID:
120673830
NCBI-ProteinID:
XP_039810783
LinkDB
All DBs
Position
5N:complement(41345056..41349454)
Genome browser
AA seq
512 aa
AA seq
DB search
MSSVYVLEPPTKGKVVVQTTAGPLDIELWPKEAPKAARNFVQLCLEGYYDGTLFHRVIKN
FLVQGGDPTGSGTGGESIYGAPFADEFHSRLRFNHRGLVACANAGTPHSNGSQFFITLDR
CDWLDKKNTIFGKVTGDSIFNLLALADVETDKDDRPVYPQKILSVEVLWDPFEDIVPRQL
KKAEFVAKADAEVKPKKKAVKQLNVLSFGDEVEEEENEAASSVPAKIKSIHDVLDDPRFL
KGEPEDVQLSKEQEEKKKDTVLSVRDALISKKVDSREPEHAPESDDYPEDENEEDFDNRM
RSQILKKRRELGDVPPRETSKADKPHRKDKELPDRRAEIKHRRDNDDDDNQEHELQKSKK
LSLKKKGIGSEASAERMSRTDANLQLLNPAEQERHLQKQKKRRLQGREDETLAKLQKFKA
SFLSKNPATDHIKEKNPATDKAEKEAEEDYTGWHTNRLSFLPDSSKDGMARKDDPDDYVV
VDPLLEKGKEKFNKMQAKLKRREREWAGRSLT
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcggtgtacgtgcttgagcccccgacgaagggcaaggtggtggtgcagacgacg
gctggcccgctcgacatcgagctgtggcccaaggaggcccccaaggcggcgcgcaacttc
gtgcagctctgcctcgagggctactacgacggcaccctcttccaccgcgtcatcaagaac
ttcctcgtccagggcggagaccccactggctccggcaccgggggtgagagcatctatggc
gcgccgtttgcagatgagttccactcgcggctgaggtttaaccacaggggtttagtcgcg
tgcgccaatgctggcacgcctcattcaaacgggagccagttctttatcacccttgaccgc
tgcgattggcttgacaagaagaacaccatctttgggaaggttactggtgattctattttc
aaccttcttgccttggctgatgttgagacagataaggatgatcgacctgtgtatccacag
aaaattctttcagtagaggttctctgggacccatttgaggatattgttccaaggcagctc
aagaaggctgagtttgttgccaaggctgatgctgaggtgaaacctaagaagaaggcagtt
aagcaacttaatgtgctctcttttggagatgaagtagaagaggaggagaatgaggcagct
tcctctgttccggccaaaataaaaagtattcatgatgtgctagacgatccccgtttcctt
aaaggggaaccagaggatgtacagctgtccaaggagcaagaggagaagaaaaaagacact
gttttatctgtcagggatgctttgatctcaaagaaagttgactcaagagagccagagcat
gctccagaatctgatgattatcctgaagacgagaatgaagaggattttgacaatagaatg
cgttcacaaatcctaaaaaaacgtagagaacttggtgatgtcccccctcgtgaaacttct
aaagcagataaaccacatcggaaggataaggaattaccagaccgcagggccgaaattaaa
cataggagggacaatgatgacgatgacaatcaggagcatgaactacaaaagtctaaaaaa
ctatcattgaagaaaaaaggtattggctcagaagccagtgctgagaggatgtccagaaca
gatgcaaatttgcagcttctaaatccagctgaacaagagagacatttgcaaaaacagaaa
aaacgccggcttcaaggccgtgaagacgagactctagcaaagctacagaagttcaaggct
tctttcctcagtaagaatcctgctacagatcacatcaaagaaaagaatcctgctactgat
aaggcagaaaaggaagctgaagaggactacacggggtggcatacaaaccgtctgtctttc
ttacccgattcttccaaggatggaatggctaggaaagatgatccagatgactatgtggtg
gtagatcctcttctggagaaaggaaaagaaaaattcaacaagatgcaagcgaagcttaag
cggagagagcgtgaatgggcaggcagatctctcacctga
DBGET
integrated database retrieval system
