Panicum virgatum (switchgrass): 120673832
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Entry
120673832 CDS
T07260
Name
(RefSeq) dnaJ protein P58IPK homolog B isoform X1
KO
K09523
DnaJ homolog subfamily C member 3
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120673832
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pvir03110
]
120673832
Chaperones and folding catalysts [BR:
pvir03110
]
Heat shock proteins
HSP40 / DNAJ
120673832
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DnaJ
TPR_2
TPR_1
TPR_14
TPR_19
TPR_16
TPR_11
TPR_9
TPR_8
TPR_17
ARM_TT21_N
TPR_12
Alkyl_sulf_dimr
TPR_CcmH_CycH
TPR_15
TPR_Slam
ANAPC3
BTAD
UBact
Motif
Other DBs
NCBI-GeneID:
120673832
NCBI-ProteinID:
XP_039810786
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Position
5N:complement(72217273..72221188)
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AA seq
472 aa
AA seq
DB search
MVRAWGRTALPPLLILCLLHLQYSPLVFAQEGQEKEPATLFARASEMMNLRRYDGALGLL
NAVLEVDPNHSEAYRQRASVLRHKCRYKEAEIDYNKYLELNPGTATVEKELSQLLQAQSS
LQSAYGQFDSGDFSKVLEYINKIVLVFSPGCLKAKLLKAKALLAQKDYSSVISETGFILK
EDEDNLDALLLRGQAYYYLADHDVASRHYQKGLRLDPEHSDLKKAYFGLKNLLKKSKSAE
DNAAKGKLRLSAEDYKKALAMDPDHTAYNVHLYLGLCKTLVILGRGKEAISSCTEALNID
SDLVDALIQRGEAKLLSEDWEGAVQDLKEAAQKSPQDMGIREALMRAEKQLKLSKRKDWY
KILGISKTASAAEIKRAYKKLALQWHPDKNVDNREEAENMFREIAAAYEVLGDEDKRVRY
DRGEDVDEMNMGGGGGGFNPFGGGGQQYTFHFDGGFPGGGFPGGGGFQFNFG
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgggcatgggggcggacggcgctgcctccgctcctcatcctctgccttctccac
ctgcagtactccccgctggtcttcgctcaagaaggtcaagaaaaggaacctgctactctg
ttcgcacgagcatcggagatgatgaacctgaggaggtatgatggggcacttggcctgcta
aatgctgtgttggaagttgacccaaatcattctgaagcttacaggcagcgtgcatcagtg
ctccgccataagtgcagatacaaggaagctgagatcgactataacaaatacctggagtta
aatcctgggactgctacagtggaaaaggaattatctcagcttctgcaggctcaaagttca
ttacagtctgcttatggccagtttgattccggagacttttcaaaagtcctggaatacatc
aacaaaattgtacttgttttttctccaggttgcttgaaggcaaagcttctcaaggctaaa
gcattgttagcacagaaagactactcaagtgttatttcagagacaggatttattctaaag
gaagatgaagacaacttggatgcactgctactacgtggtcaggcttattattaccttgct
gatcatgatgtggcctccaggcactaccagaaagggcttcgtcttgacccagagcattca
gatttgaagaaagcatatttcgggttgaagaatcttttgaagaagtctaagagtgctgaa
gataatgctgccaagggtaagctacgtttgtctgctgaggactacaagaaagctctagca
atggatcctgaccatactgcatataatgtacatctttatctcgggttatgtaaaactctg
gttatacttgggagaggtaaggaggccatcagcagttgtactgaagcactcaacatagac
agtgatcttgttgatgcgcttatacagagaggtgaagctaaacttctctcagaagattgg
gaaggagcggttcaggatctaaaagaggccgcccagaaatccccacaggacatgggcatc
cgtgaagcacttatgagagccgaaaagcagcttaagttgagcaaaagaaaagactggtac
aaaatccttggtatttcaaagacagcatcagctgctgagataaagcgtgcctacaaaaag
ctggccttgcagtggcatccagataaaaacgtggataaccgggaggaagcagaaaacatg
ttccgagaaattgctgctgcttatgaggtgcttggtgatgaagacaaacgtgtgagatat
gaccgaggagaggatgtcgacgagatgaacatgggaggaggcgggggtggcttcaatcct
ttcgggggaggaggccagcaatacacgtttcatttcgatggtggattcccgggtggtggc
ttccctggaggtggaggctttcagttcaactttggatga
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