Panicum virgatum (switchgrass): 120673836
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Entry
120673836 CDS
T07260
Name
(RefSeq) ras-related protein Rab7-like
KO
K07897
Ras-related protein Rab-7A
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04144
Endocytosis
pvir04145
Phagosome
pvir04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120673836
04145 Phagosome
120673836
04148 Efferocytosis
120673836
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120673836
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvir04147
]
120673836
04031 GTP-binding proteins [BR:
pvir04031
]
120673836
Membrane trafficking [BR:
pvir04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab GTPases
120673836
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120673836
Exosomal proteins of other body fluids (saliva and urine)
120673836
Exosomal proteins of colorectal cancer cells
120673836
Exosomal proteins of bladder cancer cells
120673836
GTP-binding proteins [BR:
pvir04031
]
Small (monomeric) G-proteins
Rab Family
Rab7/9 [OT]
120673836
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
GTP_EFTU
Gtr1_RagA
ATP_bind_1
RsgA_GTPase
AAA_16
nSTAND3
AAA_7
Septin
AAA_24
AAA_22
cobW
NTPase_1
ATPase_2
PduV-EutP
SRPRB
MCM
NACHT
AAA_14
ATP-synt_ab
DAP3
G-alpha
Motif
Other DBs
NCBI-GeneID:
120673836
NCBI-ProteinID:
XP_039810791
LinkDB
All DBs
Position
5N:complement(57033766..57038692)
Genome browser
AA seq
206 aa
AA seq
DB search
MASRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF
VLLGNKVDIDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGTNVEDAFQCMVKNALKNE
PEEELYVPDTVDVVGGNRTQRSSGCC
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgcgacggcgcacgctcctcaaggtcatcatcctcggcgacagcggggtcggg
aagacttcgctgatgaaccaatatgtgaacaagaagttcagcaatcagtacaaggctacg
atcggcgccgatttcctcaccaaggaggtccagttcgaggacaggctcttcactcttcag
atatgggatactgctggacaggaaaggtttcagagtcttggtgttgcattctatcgtgga
gctgattgttgtgttctagtttatgatgttaactctatgaagtcatttgataatctgaac
aactggcgtgaagaatttctaattcaggctagcccatctgatcccgataacttccctttt
gttctgcttggaaacaaagttgatattgatggtggcaacagccgtgtggtctctgagaaa
aaggcaaaggcttggtgtgcctcaaaaggcaacataccttactttgagacatctgcaaaa
gaaggaactaatgtggaagatgcttttcaatgcatggtaaaaaatgccctaaagaatgaa
cctgaagaagaattgtacgtgcctgacactgtcgatgtggtgggtggcaatcggacccaa
aggtcatcaggctgctgttag
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