KEGG   Panicum virgatum (switchgrass): 120673836
Entry
120673836         CDS       T07260                                 
Name
(RefSeq) ras-related protein Rab7-like
  KO
K07897  Ras-related protein Rab-7A
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir04144  Endocytosis
pvir04145  Phagosome
pvir04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    120673836
   04145 Phagosome
    120673836
   04148 Efferocytosis
    120673836
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pvir04131]
    120673836
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pvir04147]
    120673836
   04031 GTP-binding proteins [BR:pvir04031]
    120673836
Membrane trafficking [BR:pvir04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    120673836
Exosome [BR:pvir04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   120673836
  Exosomal proteins of other body fluids (saliva and urine)
   120673836
  Exosomal proteins of colorectal cancer cells
   120673836
  Exosomal proteins of bladder cancer cells
   120673836
GTP-binding proteins [BR:pvir04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    120673836
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU Gtr1_RagA ATP_bind_1 RsgA_GTPase AAA_16 nSTAND3 AAA_7 Septin AAA_24 AAA_22 cobW NTPase_1 ATPase_2 PduV-EutP SRPRB MCM NACHT AAA_14 ATP-synt_ab DAP3 G-alpha
Other DBs
NCBI-GeneID: 120673836
NCBI-ProteinID: XP_039810791
LinkDB
Position
5N:complement(57033766..57038692)
AA seq 206 aa
MASRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF
VLLGNKVDIDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGTNVEDAFQCMVKNALKNE
PEEELYVPDTVDVVGGNRTQRSSGCC
NT seq 621 nt   +upstreamnt  +downstreamnt
atggcctcgcgacggcgcacgctcctcaaggtcatcatcctcggcgacagcggggtcggg
aagacttcgctgatgaaccaatatgtgaacaagaagttcagcaatcagtacaaggctacg
atcggcgccgatttcctcaccaaggaggtccagttcgaggacaggctcttcactcttcag
atatgggatactgctggacaggaaaggtttcagagtcttggtgttgcattctatcgtgga
gctgattgttgtgttctagtttatgatgttaactctatgaagtcatttgataatctgaac
aactggcgtgaagaatttctaattcaggctagcccatctgatcccgataacttccctttt
gttctgcttggaaacaaagttgatattgatggtggcaacagccgtgtggtctctgagaaa
aaggcaaaggcttggtgtgcctcaaaaggcaacataccttactttgagacatctgcaaaa
gaaggaactaatgtggaagatgcttttcaatgcatggtaaaaaatgccctaaagaatgaa
cctgaagaagaattgtacgtgcctgacactgtcgatgtggtgggtggcaatcggacccaa
aggtcatcaggctgctgttag

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