Panicum virgatum (switchgrass): 120673852
Help
Entry
120673852 CDS
T07260
Name
(RefSeq) mucin-19-like isoform X1
KO
K09527
DnaJ homolog subfamily C member 7
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pvir03110
]
120673852
Chaperones and folding catalysts [BR:
pvir03110
]
Heat shock proteins
HSP40 / DNAJ
120673852
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
DnaJ
TPR_8
TPR_19
TPR_12
ANAPC3
TPR_11
TPR_14
TPR_MalT
TPR_16
TPR_6
Motif
Other DBs
NCBI-GeneID:
120673852
NCBI-ProteinID:
XP_039810824
LinkDB
All DBs
Position
5N:15039703..15051839
Genome browser
AA seq
1217 aa
AA seq
DB search
MDPAPDPLAFSASAPFPTIPAASSPRPRAGRPRRHAAPFRSDHPAAAAIRRSGIDLSRRP
VASAFAQQESSPSVGSWGASRGASFVFGSGAAGAPEMRRCFSSGSGEAFLTDLPAAVDEL
ALDDGSGRQWRSVEVNQGGADMDWAATSAAPRRSGASTSPASSAASWPPPPPSPPPAPAA
AASATCSAAPATAATSGTASRAAAGSAPAPTATRTGSSGAPAAAPPPPEQGDRRGERETR
GGRGPVSPPLPSATAGRRSDADAPGGDDPEPVMNANDPFCTRGSNSSLYECLIPDSLHDQ
TEKLDEGSRAPSQTVQIQCDSVEAISLASPTCSDHDAPIEFARFGDSLSVDEGSLPEDGN
GSKISAHCVNVQRDVFVFGGHAGYRDLTANATQTSISKVDSADKDGVPYNSGQLNASVAK
DSTCTKFILQDAKHAFGSTNKNPLHSEPCEISSTAKFCSSFGSEDGSAKVSFINVPYDIE
GVEASELNECRSFSEKSFTAQDHNLASKNRGVKGVVKNRRTVMPKKFSSAHQISSLESVP
RRSDNCSGKASLEENVYLNVASSFALSDSGINCAQGNSYNSALQIADSSHGGTEFNSLTN
TEHSGQSDFIFSASTFNQSTLHSQRRHSKKKSGGMCNHANSIQSLPSSAIGPARSEVSAS
QQCAISAAQWTEYSKMEPNRVTVCTKTENFEHHEDCETWRLRGNQAYAEGQLTKAEECYT
HGIDSFSPNEASKKALMLCYSNRAATRMSLGKMREALSDCREAIGIDSSFLKAQVRAANC
LLALGDVEEAQKAFEMCLKSNHLSSLDHKIVEEASDGLQKAQKISGFIHQSKEYLIKKAF
DKIPSALQMISDALFISIYSDNLMAMKAEALLLLQRYEEVIQFCEETLYVAERNSLCFCP
DNHSESNNLDNNTCSVKLWRYHLIAKSYFFLGKLEEAHQFLKKFDQVKVMECRCGKQSQE
SISSFSMAISELLRLKAAGNEAFQSGKYLEAVEHYTTALLSNSESLRFLAVCFCNRAAAY
QAMGQILDAIADCSLAIALDADYAKAISRRSSLYELIRDYDQAENDLRRLITLLEKQLQE
NMSMPSEKTESIRSNLNRANLRFSSLKRDARKGTSLNVYLILGIEPSSSAVDIKKAYRKA
ALRHHPDKAGKFLVKSENISDAVWGEITNEIRKDADYLFKIIGKAYSMLSDLTMIRLFLC
FQMCQVAIMNTSMKNQC
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atggaccccgcgcccgatccgctcgccttctccgcctccgccccgttccccaccatcccg
gccgcctcgagccccaggccccgcgccgggaggccgcggcgccatgctgcgcccttccgt
tccgatcaccccgccgccgccgcgatccgccgctccgggatcgatctctcgcgccgcccc
gtggcgtccgccttcgcccagcaggagagctcgccgtccgtgggctcctggggcgcctct
cgcggcgccagctttgtgttcgggagtggcgcggccggggcgccggagatgaggaggtgc
ttctcgtccggatccggtgaggcctttctgaccgatctcccggctgcagttgacgagctc
gcgctggatgacggttccggcaggcagtggcggagcgtggaagtaaaccaagggggggcc
gacatggattgggccgccacctcggcggcgccgaggaggtccggcgcctccacgagtccg
gcgagctccgccgcatcgtggcccccgcccccgccttcccctccgcctgcgcccgctgcg
gcggcgagcgctacgtgttctgcggcgcctgcgacggcagccacaagcggtacagcctca
agggcggcggcaggttccgcgcctgcgccgactgcaacgagaacgggctcgtccggtgcc
ccggctgctgcgcccccgccgcctgagcaaggggacaggcgaggtgagcgcgaaacaagg
gggggccggggcccagtttcgcctccattaccctccgccactgccggcaggcgaagcgac
gctgatgctcctggaggagatgatccggagccagtgatgaacgccaatgatcccttttgc
acccgcggaagcaattccagcttgtatgagtgtttgattccggactctcttcacgatcag
actgagaagctcgacgaagggagcagagccccatctcaaactgtacaaatacaatgtgac
agtgtggaggcaatatctttagcttcaccaacctgttccgaccacgatgctcctattgaa
tttgcaaggtttggggacagcttatctgtggatgaaggtagtttgccagaggatggaaat
ggaagtaagatttctgctcactgtgttaatgttcagagggatgtctttgtttttggtgga
catgctgggtatcgggatttaactgccaatgcaactcaaactagcattagtaaggtagat
tcagctgataaagatggtgtaccatataactctggacaacttaatgcttctgttgctaaa
gatagcacttgcaccaagtttattttgcaggatgcaaagcatgcatttggttcgactaat
aagaatcctctacactcagaaccttgtgaaatttcttctacagcaaaattttgttctagc
tttggatctgaagatggtagtgcgaaggtctctttcataaatgtgccttatgatattgaa
ggagtagaagcttcagaacttaatgaatgcaggtcattcagtgagaaatctttcactgct
caagaccacaatttggcatctaagaacagaggagttaagggtgtggtaaaaaacagaaga
actgttatgccaaagaaattctcctcagctcaccagatttcttccttggaatcagttcca
agaagaagtgataattgctctggaaaggcatcgcttgaagaaaatgtctatttgaatgta
gccagtagctttgcattatcggactctggtatcaactgtgcccaaggcaattcttacaac
tctgctttgcaaatagcagacagtagccatggtggaacggagtttaattctttaacaaac
acggaacattctggtcaatctgatttcatattttctgcatcaacttttaatcaaagtaca
ttgcactcacaaagacggcatagcaagaaaaaaagtggaggaatgtgtaatcacgctaac
tctattcaaagccttccttcatctgccattggacctgcacgctcagaagtttcagcaagt
cagcaatgtgcaatttcagctgctcagtggactgaatacagcaaaatggaacctaatagg
gtaaccgtatgcacaaaaacagaaaactttgaacaccatgaagattgtgaaacatggcgt
ttaagggggaatcaagcatatgcagaagggcagttaactaaggctgaggaatgctatacc
cacgggattgattctttttctccaaatgaagcttctaaaaaggcattaatgctgtgctac
agcaatcgtgcagctactcggatgtctctgggtaagatgagagaggccctatctgattgt
cgagaagctattggtattgattccagctttctcaaggcacaagtcagagctgccaactgc
ttacttgccctgggggatgtggaagaagcacaaaaggcttttgagatgtgtttgaagtct
aatcatctgtcaagcttggatcataaaattgtagaagaggcttctgacggtctacaaaaa
gctcagaaaatatctggttttattcatcagtccaaggagtatcttataaaaaaggcattt
gacaagatacccagcgccttgcaaatgatctctgatgctttgttcataagtatttattca
gataacttgatggcaatgaaagcagaagcactgttactgctgcagcgatatgaagaagta
atccaattttgtgaagagactctttatgtagcagaaaggaatagcttgtgtttttgtccg
gacaatcattcagaaagcaataacttggacaacaatacttgctctgtgaagttgtggcgt
tatcatcttattgctaagtcgtatttcttccttggaaagcttgaagaagctcaccagttc
ttaaaaaagtttgaccaagtaaaagtcatggaatgcaggtgtggaaagcaatctcaggaa
tcaatttcatcattctctatggcaatatctgagctactgcggcttaaagctgctggtaat
gaagcatttcaatctggtaaatatttggaggctgtagaacattataccactgctttgcta
agcaatagtgaatcactacgctttttagcagtctgcttttgtaaccgtgcagcggcatat
caagcaatgggtcaaattttagatgcaattgcagattgctcactagccatagcccttgat
gcagattatgctaaggctatttccagaagatctagtttgtatgaactcataagggactat
gaccaagcagaaaatgatctccgtaggttaattactcttcttgagaaacaactgcaagaa
aatatgtccatgccatcagagaagacagagagtattcgtagcaatctgaatcgagccaat
cttcggttttcttctctgaagcgggatgcaagaaaagggacctcattaaatgtgtacttg
atattaggaatcgaaccttcttcctctgccgtggatataaaaaaggcataccgcaaagca
gctctaaggcatcatccagacaaagctggtaaatttcttgtcaaaagtgaaaatatcagc
gatgcagtatggggagaaatcacaaacgaaatccgcaaagatgctgattatttattcaaa
ataattggaaaggcatattctatgctttcagaccttacaatgataagattgttcctttgc
ttccagatgtgccaagtggctattatgaatacctccatgaaaaatcaatgctga
DBGET
integrated database retrieval system
