Panicum virgatum (switchgrass): 120673872
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Entry
120673872 CDS
T07260
Name
(RefSeq) probable glucuronosyltransferase Os01g0926400 isoform X1
KO
K20870
putative beta-1,4-xylosyltransferase IRX10 [EC:2.4.2.-]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pvir01003
]
120673872
Glycosyltransferases [BR:
pvir01003
]
Polysaccharide
Structural polysaccharide
120673872
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Gene cluster
GFIT
Motif
Pfam:
Exostosin_GT47
RXYLT1_C
Motif
Other DBs
NCBI-GeneID:
120673872
NCBI-ProteinID:
XP_039810848
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Position
5N:complement(69340739..69344773)
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AA seq
418 aa
AA seq
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MGRERRPWPAAAAAVLLLVASCVAAAPLQQHQRARITGDAGGVLDDNPVGKLKVFVYEMP
RKYNQMLLSKDSRCLHHMFAAEIFTHQFLLSSAVRTLDPEEADWFYTPVYTTCDLTPQGF
PLPFRAPRIMRSAVKYVATTWPYWNRTEGADHFFLTPHDFGACFHYQEERAMERGILPLL
RRATLVQTFGQRNHVCLQEGSITIPPYANPHKMQAHLINPGTPRSIFVYFRGLFYDMGND
PEGGYYARGARASVWENFKDNPLFDISTEHPSTYYEDMQRAIFCLCPLGWAPWSPRLVEA
VVFGCIPVIIADDIVLPFADAIPWEQISVFVAERDVPRLDSILTSIPLQDILRKQRLLAG
ASVKQALLFHQPARPGDAFDQILNGLARKLPHGKGVFLQPGEKVLDWDAGLESDLKPW
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggggcgggagaggaggccgtggccggcggcggccgccgccgttcttctgctcgtcgcc
tcctgcgtcgccgcggcgccgctgcagcagcaccagcgcgccaggatcacaggggacgcc
ggcggcgtgctggacgacaacccggtggggaagctgaaggtgttcgtgtacgagatgccg
cgcaagtacaaccagatgctgctgtccaaggacagccggtgcctgcaccacatgttcgcg
gccgagatcttcacgcaccagttcctgctgtccagcgcggtgcggacgctggacccggag
gaggccgactggttctacacccccgtgtacaccacctgcgacctcacgccgcagggcttc
cccctcccgttccgggcgccacgaatcatgcgcagcgccgtcaagtacgtcgccaccacg
tggccctactggaacaggaccgagggcgccgaccacttcttcctaacaccccacgacttc
ggcgcctgcttccactaccaggaggagagggcgatggagaggggcatcctgccgctgctc
cggcgcgcgacgctggtgcagacgttcgggcagcggaaccacgtgtgcctgcaggagggg
tccatcaccatcccgccctacgccaacccgcacaagatgcaggcgcacctcatcaacccc
ggcacgccgcgctccatcttcgtctacttccgcggcctcttctacgacatgggcaacgac
cccgagggtggctactacgccaggggcgcgcgcgcgtcagtgtgggagaacttcaaggac
aacccgctgttcgacatttcgacggagcacccgtcaacgtactacgaggacatgcagcgc
gccatcttctgcctgtgcccgctggggtgggcgccgtggagcccgcggctggtggaggcg
gtggtgttcggttgcatcccggtgatcatcgccgacgacatcgtactgcccttcgcggac
gccatcccctgggagcagatcagcgtgttcgtggcggagcgcgacgtgccgcgcctcgac
tccattctcacctccatcccgctccaggacatcctcaggaagcagcgcctgctcgccggc
gcgtccgtcaagcaggcgctgctcttccaccagcccgcaaggcccggggacgccttcgac
cagatactcaacgggctggcgcgcaagctgccgcacggcaagggcgtgttcctccagccc
ggggagaaggtgctcgactgggacgctgggctcgagagcgacctcaagccttggtag
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