Panicum virgatum (switchgrass): 120673960
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Entry
120673960 CDS
T07260
Name
(RefSeq) protein INVOLVED IN DE NOVO 2-like
Organism
pvir
Panicum virgatum (switchgrass)
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Gene cluster
GFIT
Motif
Pfam:
XH
XS
GAS
zf-XS
Motif
Other DBs
NCBI-GeneID:
120673960
NCBI-ProteinID:
XP_039810940
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Position
5N:48076486..48080531
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AA seq
638 aa
AA seq
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MGHNMGEGSEFEEWEAKTYAGLISGDLKVKNGERYKCPFCSSGGKGYCSINGLLRHASIV
AGASTNSGVKATHSALIKYLNNSYGTSSEPQSQQVAVEPRLPENRGKQYVWPWMGVLVNL
PTKWEDGHRVGASAARLKEQLSRFCPLKVAALWNTRGHTGTAIMEFGKDWSGFENARAFG
SYFVAEGHGKTDWKKKKNGYSGLFGWVAMDEDYIFQGPIGAHLRKSGDLKTINEFENERV
QRADKLVSQLSSQVEVKDRHLNELEWEYNGIIESLDKMVRENEKLRLSHEKCISEKQQQA
RVRSLAIIERNKMLHLELDSKINELDLRTKRPYDLASSSNYDRRSTEQEKQMNAMESNHL
KMAMLEQERAKENVLKRLEEQVREKKDIFNKIEKLKEQFYQKKTLEFQIQQTKGELGVMK
HMPYGEGSELKNKMDELSKNLKEKEDELDVLSKELKEKEDELGKMQSHTNTLIVKDRESN
AMLQEARSILEKGLKLSTSGRAHIGIKLVGQLDPKPFLNACLQRLSKGDAELRAGELCSE
WQHQIKNSNWHPIKVVEVDGKEPERIIVDDANLQELKDEYGQEVYAAVTKALLEIDEYNG
SGRYCKPVMWNFKADRRATLTEGVRFIIKQWQSHKRKR
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgggtcacaacatgggtgaaggttctgagtttgaagagtgggaagccaaaacttatgca
ggcctgatttcaggagatttgaaagttaaaaatggtgagaggtacaagtgccccttctgt
agctctggcggaaagggatattgcagtataaatggcttgcttcggcacgcctcaatagta
gcaggtgcttcaaccaactctggagtgaaggcaacccacagtgctctcatcaagtatttg
aacaatagctatggtacatcatctgagccacagtcccagcaggtagctgtggagccaaga
cttcctgagaacagaggtaagcagtatgtctggccatggatgggtgtcctagttaacttg
cctaccaaatgggaagatggtcatcgggttggagcaagtgcagctaggttgaaggagcaa
ctatcacgtttttgcccgctcaaggtcgctgctttatggaatactagaggtcatacaggg
actgctattatggaatttggaaaagactggagtggatttgaaaatgcacgggcctttgga
agttacttcgtggcagaaggacatggtaaaacagattggaagaaaaaaaagaatggctac
tcagggcttttcggctgggttgcaatggatgaagattacattttccagggaccaataggg
gcccacttgagaaaaagcggtgacctgaaaaccatcaatgaatttgagaatgaaagagta
caaagagcagataaacttgtatctcaattatctagccaagttgaggtgaaggatagacat
ttgaatgagcttgaatgggaatacaatgggataattgagtcgcttgacaagatggtcagg
gaaaacgaaaagcttagactatcgcatgaaaaatgtattagtgagaagcagcagcaagcg
cgcgtgcgttccctggctattattgagaggaataaaatgctgcatttggaactcgactcc
aagataaatgaacttgacttgagaaccaaacggccttatgatcttgcttcaagcagtaac
tatgacagaaggagcactgaacaggagaagcagatgaatgctatggaatcaaaccatctt
aagatggcaatgctagaacaagaaagagccaaggagaatgtgctgaagcgtctggaagaa
caagtgcgagagaaaaaagatattttcaacaagattgagaagttgaaagaacagttttat
caaaagaagacccttgaatttcaaatacaacagacgaagggagaactaggtgtgatgaag
cacatgccatacggtgaaggttcagaattgaagaataaaatggatgagttgagtaagaat
ctgaaagaaaaggaggatgaactggatgtgttgagtaaggagttgaaagaaaaggaggat
gaactcggaaaaatgcagtcacacaccaacactctgattgtcaaggacagggaaagcaac
gctatgttacaagaagctcgaagcatactggaaaaaggccttaagctttcaacaagtggc
agggcgcatataggaatcaagttagtcgggcagcttgatccgaaacctttcttaaatgct
tgtctacagaggttgtcaaaaggtgatgcagaacttcgtgctggcgaactttgttcagag
tggcaacaccaaattaaaaattcaaattggcatccaattaaggttgtcgaggttgatggg
aaagagccggagaggataatcgtggacgatgcaaatctccaggagctgaaagatgagtac
ggtcaagaagtctatgcagcagtgacgaaggcgctgctcgagatagacgagtacaatggc
agcggcaggtactgtaagccggtgatgtggaacttcaaggcagaccggagagcgacgctg
acggaaggcgtgcggttcatcataaagcagtggcagtcgcacaagaggaagcgctga
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