Panicum virgatum (switchgrass): 120673979
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Entry
120673979 CDS
T07260
Name
(RefSeq) protein PIGMENT DEFECTIVE 338, chloroplastic-like isoform X1
KO
K02945
small subunit ribosomal protein S1
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
120673979
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
pvir03011
]
120673979
Ribosome [BR:
pvir03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
120673979
Bacteria
120673979
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
Motif
Other DBs
NCBI-GeneID:
120673979
NCBI-ProteinID:
XP_039810973
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All DBs
Position
5N:complement(42744757..42748294)
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AA seq
233 aa
AA seq
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MQLDEPIEVKIYEWNTGGLLTRIEGLRAFLPKVELMDRIGTFTDLKNKVGCSIRVCIARL
DEETNDLIISEKKAWEMTYLREGTLLQGSVRKIFPYGAQVRIAGTNRSGLLHISNISRGR
VLSVNDVLKIDDEVKVLVIKSNVPDKIALSIADLESAPGLFLSDREKVFSEAEEMAKRYR
EQLPVISQNTMLDDSLPGETLPFDDEAKLYANWKWFKFLHHNKPGDNSSWDLP
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgcaactcgatgagccgattgaggttaaaatttacgagtggaacaccgggggtctactg
acaagaatcgaggggttgagagcattccttcctaaagttgagcttatggataggataggt
acatttacagacttgaaaaacaaagttggctgcagcattcgtgtgtgcattgcaaggctc
gatgaagaaactaatgacctgataattagtgagaagaaagcatgggaaatgacttatctt
agagaaggaactctcctacaaggaagtgttcgcaaaatttttccatatggtgcacaagtt
aggattgctgggacaaacagaagtggattattgcacatatcaaacattagtagaggtcgt
gttttgtcagtaaacgatgtcctaaagatagatgatgaggtaaaagttctcgtgatcaag
tcaaatgtcccagacaaaatcgcactgagcatagcggacctcgagagtgcacctggttta
tttctttcagacagagagaaagtgttctcggaagctgaggaaatggcgaagagatacagg
gagcaacttccagttatatctcagaacaccatgttagatgatagccttccaggagaaacg
ctaccatttgatgacgaagctaaactgtacgcgaactggaaatggttcaaatttctgcat
cataacaaacctggtgacaacagcagctgggatctgccatag
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