Panicum virgatum (switchgrass): 120673989
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Entry
120673989 CDS
T07260
Name
(RefSeq) beta-amylase 3, chloroplastic-like
KO
K01177
beta-amylase [EC:
3.2.1.2
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00500
Starch and sucrose metabolism
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
120673989
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.2 beta-amylase
120673989
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Ortholog
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GFIT
Motif
Pfam:
Glyco_hydro_14
DUF1072
Motif
Other DBs
NCBI-GeneID:
120673989
NCBI-ProteinID:
XP_039810986
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All DBs
Position
5N:691913..695787
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AA seq
589 aa
AA seq
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MLPYQNRGKKERKWLRTRYTRADRAREGQPHTHKAAAAAAAAPPMAAITAPPPPPPASTS
CRLPRRGGPLTRIAAASSSPSSRFRPSSTRRPSSSTSFSAAGSSGGGGEILHVSPPSPPA
NPPGAPVYVTLPADAVGPGGRVARRRAMGASLAALAAAGVAGVAFELWWGVVERQGPGEY
DWAGYLDLAAMARRHGLRVRAILAFHQCGAGPHDPLWIPLPKWVLEEMDKVPDLSYTNRY
QQRNKEYISLGCDSLPVLKGRSPMQAYSDFMRSFRNTFEDYLGAIVTEVQVGMGPGGELR
YPSCPTEKLNQPGSTSKLGEFQCYDKFMQASLSAHAQILGIQEWGSGGSIGIDGSQHNLE
ESSFFRADGGYWDTPYGHFFLEWYSGMLVLHGERLCMIADTIFSGTGVTISGKVAGMHWH
YYTCAHPSELTAGYYNTLLRDGYLPIAQMFAKYKAALCCGCFDLRDAEKTNPESSPEGTL
RQLIGAAKMCNLPLNGENSVTRLDDASLNQVIRSSRLYSGRSSGTSFSFNYVRMNKSLFE
FHNWSRFTKFVRQMSDARTFLARLDVRRGQQYLSSMSVVWVVSRACAYT
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgctaccataccaaaacagaggaaagaaggaaagaaagtggttgaggacacgatacact
cgcgcggatcgagcccgagagggacaaccacacacacacaaggcggcggcggcggctgct
gcggctcctccaatggcggcgatcaccgcgccgccgccccctcctcccgcctccacctcc
tgccgcctcccccgccgcggcgggcctctaacccgcatcgccgctgcctcctcttcccca
tcctcccgcttccgcccctcttccacccgccgcccatcctcttccacctccttctccgcg
gccggcagcagcggcggcgggggcgagatcctccacgtctcgccaccttctccacccgcc
aaccccccgggggcgcccgtctacgtcacgcttcccgccgacgccgtcggcccggggggg
cgcgttgcgcgccgccgcgccatgggggcctcgctcgccgcgctggcggccgccggggtc
gccggcgtcgccttcgagctctggtggggcgtcgtcgagcgccagggccccggggagtac
gactgggccggctacctcgacctcgccgccatggcccgccgccacggcctccgcgtgcgc
gccatcctcgccttccaccagtgcggcgctggcccgcacgacccgctctggattcctttg
ccaaagtgggtgcttgaggagatggataaggttccagacttgtcatataccaatagatac
cagcagagaaacaaagaatacatctcattggggtgtgatagtcttcctgttctgaaagga
agatcacctatgcaagcttactcagacttcatgagaagcttccgcaatactttcgaagat
taccttggggccatagtaacagaagttcaagttggaatgggcccaggaggtgagcttagg
tatccatcatgcccaactgagaagctgaatcagccaggcagtacatccaaacttggggaa
tttcaatgttatgacaagtttatgcaagcatcattgagtgctcatgcacagattcttggg
atccaagagtgggggagtggtggttcaattggcatagatggctcacagcataacctcgaa
gaaagtagtttttttcgcgctgatggaggatattgggatacaccttatggtcactttttc
cttgagtggtattcaggaatgcttgtcctccatggagaaaggctatgcatgatagctgac
actattttctccggtactggtgtgaccatctcaggaaaggttgctggcatgcattggcac
tattatacttgtgcacacccatctgaactgacagctggctactataataccctactgaga
gatggttaccttcctattgctcaaatgtttgccaagtacaaagctgcactgtgctgcggt
tgttttgacctgagggatgcagaaaaaacaaatcctgagagcagtccagaagggaccctt
cggcaacttataggtgctgcaaaaatgtgcaatcttccccttaatggtgaaaattctgtg
actaggctggatgatgcatcactgaaccaagtgataagaagctcaaggctctattcaggt
cggagttcaggaacctcattttccttcaactatgttaggatgaacaaaagcttatttgag
ttccacaattggagtcgatttacaaagtttgttaggcagatgtcagatgccagaaccttt
cttgcaagactagatgtcaggagagggcagcaatacttgtcttcaatgtcagttgtttgg
gtagttagtagggcatgtgcatatacatga
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