Panicum virgatum (switchgrass): 120673990
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Entry
120673990 CDS
T07260
Name
(RefSeq) RNA-binding protein pno1-like
KO
K11884
RNA-binding protein PNO1
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pvir03009
]
120673990
03051 Proteasome [BR:
pvir03051
]
120673990
Ribosome biogenesis [BR:
pvir03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
120673990
Proteasome [BR:
pvir03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
120673990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_PNO1_2nd
KH_1
KH_KRR1_2nd
KH_KRR1_1st
Motif
Other DBs
NCBI-GeneID:
120673990
NCBI-ProteinID:
XP_039810987
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All DBs
Position
5N:complement(60023500..60027117)
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AA seq
227 aa
AA seq
DB search
MEVERAETAAAAGGSSAEMAVDNAAGPAAVEKPRFDALMPSEMSGGRPQFRKVPVPQHRF
APLKRCWMEIYTPVYEHMKVDIRMNIKARRVELKTRKDTPDVSNLQKCADFVHAFMLGFD
IADAVALLRLDDLYVDSFEIKDVKTLRGEHLSRAIGRLSGKGGKTKYAIENSTRTRIVIA
DTKIHILGSFVNIKVARDSLCSLILGSPAGKVYSKLRAVSARLAERY
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atggaggtcgagagggccgagaccgccgccgcggcagggggttcctccgctgagatggcg
gtggacaacgccgcggggccggccgccgtggagaagccgcggttcgatgctctgatgcct
agcgagatgagcggtgggaggccccagttccggaaggtgcccgtgccgcagcaccgcttc
gcgccgctcaagcgctgctggatggagatctacacaccagtctatgagcacatgaaggtc
gacatccgcatgaacatcaaggcaagaagggtggaactcaaaacaagaaaagacacacca
gatgtgagcaaccttcagaaatgtgcggactttgtgcatgcttttatgcttggatttgac
attgccgatgctgtcgccctgctgcgtcttgatgatctttatgtggattcctttgagatc
aaggatgtgaaaacccttcgaggggagcacctgtcacgtgctattggccgcctatcaggg
aaagggggcaagaccaagtatgccattgagaactctaccaggacccgaatcgttattgct
gatacaaagatccatatactgggatcctttgttaacatcaaggttgctcgggattcactt
tgcagcctcatcttgggttctcctgctggcaaagtgtattctaagcttagggctgtatct
gctaggttggcggaaaggtattga
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