Panicum virgatum (switchgrass): 120673995
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Entry
120673995 CDS
T07260
Name
(RefSeq) probable calcium-binding protein CML16
KO
K13448
calcium-binding protein CML
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
120673995
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Motif
Pfam:
EF-hand_1
EF-hand_7
EF-hand_5
EF-hand_6
EF-hand_8
EF-hand_FSTL1
Dockerin_1
SPARC_Ca_bdg
EF-hand_9
AIF-1
Motif
Other DBs
NCBI-GeneID:
120673995
NCBI-ProteinID:
XP_039810991
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Position
5N:8892302..8893253
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AA seq
192 aa
AA seq
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MSNGTEKRAQAAAAAAAQQQRPPAVSAEMQKVFSRFDADGDGRISPSELAAVSRAISPPP
SSSHGGREVAAMMDELDTDRDGYVDLGEFAAFHARSAGRGDDGELEAELRAAFDVYDVDG
DGRITTAELGKVLAQIGEGCSAEECERIIANVDVDGDGCVGFEEFKTMMAPQPQGSTAAD
APGGGLPDKAKE
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacggcaccgagaagcgagcccaggcggcggcggcggcggcggcccagcagcag
aggcccccggcggtgtccgcggagatgcagaaggtgttctcccgcttcgacgcggacggc
gacggccggatctccccctcggagctggccgcggtttcgcgcgccatctccccgccgccg
agctcctcgcacgggggccgcgaggtggccgccatgatggacgagctcgacacggaccgc
gacggctacgtggacttgggcgagttcgcggcgtttcacgcgcgatccgccggccgcggg
gacgacggcgagctcgaggccgagctccgcgccgccttcgacgtctacgacgtcgacggg
gacggccgcatcacgaccgccgagctcggcaaggtgctcgcgcagatcggggagggctgc
agcgccgaggagtgcgagcggatcatcgccaacgtcgacgtggacggcgacgggtgcgtc
gggttcgaggagttcaagacgatgatggcaccccaaccccaaggcagcaccgccgccgac
gcgcccggcggcggcctccctgacaaggccaaggagtga
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