Panicum virgatum (switchgrass): 120674005
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Entry
120674005 CDS
T07260
Name
(RefSeq) MADS-box transcription factor 21-like
KO
K09264
MADS-box transcription factor, plant
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120674005
Transcription factors [BR:
pvir03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, Homeotic genes
120674005
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Gene cluster
GFIT
Motif
Pfam:
K-box
SRF-TF
CCDC106
Nnf1
Motif
Other DBs
NCBI-GeneID:
120674005
NCBI-ProteinID:
XP_039810999
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Position
5N:66311942..66315568
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AA seq
264 aa
AA seq
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MGRGKIEIKRIENTTSRQVTFCKRRNGLLKKAYELSILCDAEIALVIFSSRGRLYEYSSN
SVRSTIERYKKASASTSGTAPVIDVNSHLYFQQEAAKLHQQIQTLQNSNKHLMGESIGNM
TAKELKSIESRLERGIGRIRSKKHEMLLAEIEYMQKREAELQSENMFLRAKVAEAERAQQ
EAAEDQMAVAPPPDGAEVTTELQALPPSLDPRGYYLQAQASMLAAASTASSSSSQHQQEH
HLQTALHLGYHIKVDTAAASKGFL
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atggggaggggaaagattgagatcaagagaattgagaacaccacgagccgccaagtgact
ttctgcaagcgcaggaacggcttgctgaagaaggcgtacgaactctccatcctatgcgac
gctgagatcgctttggtcatcttctctagccgaggccgcctttatgaatattccagtaac
agcgtaaggtcgacaattgagaggtacaagaaagcctctgccagcacttcggggacagct
ccggtgatagatgtcaactctcatctatactttcagcaagaagcggcaaaactgcatcag
cagatacaaaccttgcagaattcaaacaagcacctgatgggtgaatcaattggcaatatg
actgcaaaggagctcaagagcattgaaagcaggctcgaaagaggcattggtcgaatccgg
tccaagaagcatgagatgctgctggcagaaatcgaatatatgcagaaaagggaagcagag
ctgcagagtgagaacatgttcctgagggccaaggttgcagaggccgagcgagcccagcag
gaggcggcagaagaccagatggcggtggcgccgccgccggatggagcggaggtgacgacg
gagctgcaagcgctgccgccgtcgttggacccgcgcggctactacctgcaggcgcaggcg
agcatgctggccgccgcgtctactgcgtcgtcgtcgtcgtcgcagcatcagcaggagcac
cacctgcagactgccctgcacctcgggtaccacatcaaggtcgacaccgccgccgccagc
aaaggcttcctctag
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