Panicum virgatum (switchgrass): 120674046
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Entry
120674046 CDS
T07260
Name
(RefSeq) DNA repair protein XRCC2 homolog isoform X1
KO
K10879
DNA-repair protein XRCC2
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
120674046
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvir03400
]
120674046
DNA repair and recombination proteins [BR:
pvir03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecA family proteins
120674046
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Rad51
AAA_25
AAA_29
Motif
Other DBs
NCBI-GeneID:
120674046
NCBI-ProteinID:
XP_039811056
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Position
5N:65162757..65168520
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AA seq
350 aa
AA seq
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MAGETGGEPRAWLAVDETAAAFISRSLSSRPTIILPPPLHRAPLRPGNVVEISGPSNSGK
SHLLLMAAVQCILPKEWEGIYFGGLGKSVMYLDLDCRFDVLRLARILRNRIAEGSAHLRN
GDFEKDGTKDEFQCSLQNMLFSDCMQRFLYVRCYNSSEFTAALKTLQSQSRSEVLGLGIY
FVMIDSIGAFYWIDRASQPVGENKGKSLQSITETVIHEIRKFLQLQPALVLVTKAPIYAD
GTTTANDFNRGSSKYVMEDSTVLRYSRLEEERSLSFREYMPSIWQSFVTHRINLQVEAEV
PSVHENEVLSTYTSEWMQPSLKTKEKFSIVDVRSCISYSFCLLDGVILAQ
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggccggagagacgggaggagaaccccgagcgtggctagccgtcgacgagacggcagcg
gcctttatctcccgctccctctcctcgcgccccacaattatcctccctccgccgctccac
cgcgcgccgctacgcccgggcaacgtcgtcgagatctccggcccgtccaactccggcaag
tcccaccttctcctcatggctgcagtgcagtgcatattaccaaaggagtgggagggcatc
tactttgggggcctggggaagtcggtcatgtacttggatctggactgccggtttgatgtg
ctgcggctggcccgaattctgaggaatcgcattgcagagggttcagcacatctaagaaat
ggagactttgaaaaggatggcaccaaggacgaatttcagtgttctttacaaaacatgctg
ttctctgattgcatgcagcgtttcttgtatgtccgctgttacaacagttctgaatttaca
gctgctttgaagactctgcagtctcagtcaagaagtgaagttcttggtcttggcatatat
tttgttatgatagacagcattggtgctttctattggatagatcgtgcttctcaacctgtc
ggagagaataaagggaaatcactgcagagcatcactgaaactgttatccacgagatacgc
aagtttttgcaacttcaacctgcattggtgttggtcacgaaggcacccatttatgcagat
ggcactacaacagcaaatgacttcaataggggttcttcgaaatacgtgatggaggattca
actgttttgagatattcaagactggaggaagaaagaagtctctcttttcgggaatatatg
ccatcaatatggcagtcctttgttactcacaggataaacctgcaagtagaagcagaagtt
ccctctgtgcatgaaaatgaggtactttctacatatacttctgagtggatgcaaccttcc
cttaaaacaaaggagaagttttctattgtggatgtaagatcttgcatctcatattccttt
tgcttactggatggtgttatccttgcacagtga
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