Panicum virgatum (switchgrass): 120674143
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Entry
120674143 CDS
T07260
Name
(RefSeq) chitinase domain-containing protein 1-like
KO
K17525
chitinase domain-containing protein 1
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
pvir04091
]
120674143
Lectins [BR:
pvir04091
]
Chitinase-like lectins
120674143
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GFIT
Motif
Pfam:
Glyco_hydro_18
Motif
Other DBs
NCBI-GeneID:
120674143
NCBI-ProteinID:
XP_039811206
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Position
5N:46576490..46580545
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AA seq
430 aa
AA seq
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MPPRRRDRRRPRDPSPPPSDARAPPSASGIRLTRLAPAVVLVLVLAALGFSGRLSRSPPH
PQTLQTTARSVYERGLVKRDISSWEILTEHTRVSEKRSQHQFPNPVLAYVTPWNSKGYDM
AKLFSAKLTHISPVWYDLKSDRNMLVLEGEHNFDATWVSELQGNGSLVVPRVVLEAFPAV
ILLEKMQKAKAIDLIVNECRDKGYDGIVLESWSRWAVYGVLDDPELRYMALQFVKQLGEA
LHSISSKSSNRHLELIYVIPAPRMQELSNQDFGPEDLLQLADSLDGFSLMTYDFSGPQNP
GPSAPLKWVQHSLTTLLSAKGSSPSRNHSRMIFLGINFYGNDFLLSRGSGGGAITGRDFV
HLLEKYKPSLKWDEKSLEHFFIYSHEGVRHAVFFPTLMSLSVRLDEARNWGTGLSIWEIG
QGLDFFFDVL
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgcgtaggcgagatcgccggagaccccgcgacccgtcgccgccgccctccgat
gcaagggcaccaccctccgcctcaggcatccgtctcacccgcctcgcccctgccgtcgtt
ctggtcctcgtgctcgccgcccttggcttctccggccgcctctcccggtcccctccccac
ccccagacgctgcaaaccaccgcccgctccgtctacgagcgcggcctcgtcaagcgcgac
atctcctcatgggagatcctcactgagcacacaagggtttccgagaagcggtcgcagcac
cagttcccgaaccctgtcctcgcctacgtgaccccctggaactccaaaggttatgacatg
gcaaaattgttcagtgcaaagcttactcacatatcaccagtgtggtatgatttgaagagt
gataggaacatgttagttctagaaggagagcataattttgatgccacgtgggtctctgaa
cttcaaggcaatggatctctggtagtaccaagagttgtcttagaagcatttcctgctgtt
atactattggaaaagatgcaaaaagcaaaagctattgatctaatagtgaatgaatgcagg
gataagggctatgacggtattgtgctagaatcctggtcaaggtgggctgtttacggtgtg
ctggatgatccagagctacgttacatggcacttcaatttgttaagcagctgggggaggct
ttgcattcaatcagctctaaatcaagcaaccgccatttggaattaatttatgttatccca
gctccaagaatgcaagagctcagtaatcaggacttcggaccagaagatctcctgcaattg
gctgactcattagatggtttttctcttatgacatacgacttctcagggcctcaaaatcct
ggtcccagtgcacctctgaagtgggtacagcattctttaacaacactcctttcagccaag
ggttcttcgccttctcgtaaccattctcggatgatattccttggcatcaatttttacggg
aatgattttctactgtctagaggcagcggtggtggtgctatcactgggagagattttgtt
catttgctcgagaagtacaagccatctttgaagtgggatgagaaaagtttagagcatttt
ttcatctattcgcatgaaggtgtgaggcatgctgtatttttcccaacactgatgtctctt
tctgtacgtttggatgaagcacggaattggggaacaggtctttcgatttgggagatcgga
caaggtttggacttcttttttgatgttctatag
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