KEGG   Panicum virgatum (switchgrass): 120674253
Entry
120674253         CDS       T07260                                 
Name
(RefSeq) WD repeat-containing protein 13-like
  KO
K24739  WD repeat-containing protein 13
Organism
pvir  Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:pvir04990]
    120674253
Domain-containing proteins not elsewhere classified [BR:pvir04990]
 Other domain-containing proteins
  WD40 repeat (WDR) domain-containing proteins
   120674253
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_Prp19 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 WDR55 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_RIG_2nd ANAPC4_WD40 WD40_MABP1-WDR62_2nd EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_Aladin WDR90_beta-prop_4th Beta-prop_IFT140_1st Beta-prop_EML Beta-prop_WDR35_TULP_N Beta-prop_HPS5 Beta-prop_ACSF4 NBCH_WD40 Beta-prop_WDR75_1st WD40_Gbeta Beta-prop_SCAP Beta-prop_Vps41 WD40_RFWD3 Beta-prop_IFT122_1st Beta-prop_TEP1_C Beta-prop_DCAF12 Beta-prop_VPS8 WD40_like Beta-prop_RIG_1st Beta-prop_WDR41 KNTC1_N Beta-prop_SPT8 Beta-prop_Nup120_160 PQQ_2 CPSF_A
Other DBs
NCBI-GeneID: 120674253
NCBI-ProteinID: XP_039811335
LinkDB
Position
5N:complement(59185603..59191000)
AA seq 472 aa
MAAPADSASPECPAAPSMPTDPDFLSCVLQPPAPSSSRPDADYTALRRLLLRRKPPSALQ
HRMDWWCNGKGYVAYRNFLLRRIDGGSAHSTPSNSGRWAASPGPALSEADSWSSLRDLRT
NNSGLSRTVSISSKQSDTERHVRFAEPAYSFVGMHCIFDSCKTSVTILKFGRASSDLLAY
GAADGSLTVCQVSEPPSVLQKLIGHSKNITDFDFSSNNQYIASCSLDKTVRVWEISKGTC
IRVVYGVTSQLCICFHPVNNNLLLVGNSNKEINAINFSTGRVISKLNFDDAVTALDIDHT
GQLIFAGDAQGYIYTVSVNSHTGSLSRTHKNKSSKSKSPITTIQYRTFSLVARCPVLLSC
AQDGYLSFFSIATDAKGYLTLISSLKLASRVQTIRASFCPFLSLEKGEFIVTGSEDANVY
FYDLARPKNSCVNKLQGHGSPVIGVAWNHGENLLASSDSDGTVIVWKRAKTN
NT seq 1419 nt   +upstreamnt  +downstreamnt
atggccgcccccgccgactccgcctccccggagtgccccgccgccccctccatgcccacg
gacccggacttcctcagctgcgtcctccagcccccggccccttcctcctcccgccccgac
gccgactacaccgccctccgccgcctgctcctccgccgcaagccgccctccgccctccag
caccgcatggactggtggtgcaacggcaagggctacgtcgcctaccgcaacttcctcctc
cggcgcatcgacggcggcagcgcccacagtacgcccagcaacagtggaaggtgggctgcc
tctcctggccctgcactctccgaggcagacagctggagttctctccgggacttgagaact
aataacagtggtttaagccgcactgtaagcatcagttcaaagcagagtgatactgagcgc
catgttagattcgctgagcctgcatactcatttgttggaatgcattgcatttttgacagc
tgcaaaacctcagttacgatattgaaatttggtcgcgcaagttctgatctgcttgcgtat
ggtgcggcagatggcagtctaacggtttgccaagtttctgagccaccatctgttcttcaa
aaattgatagggcactctaaaaatatcacagattttgatttttcatctaataaccagtac
attgcttcatgctccctggataaaactgtgcgagtatgggaaatctctaaaggcacgtgc
attagggttgtatatggagttacttcccagctatgcatctgctttcatcctgtgaacaat
aacttgcttttagttggcaactcaaacaaggaaatcaatgcaataaattttagcactggg
agagtaatcagcaaacttaactttgatgatgcggttacagctttggatattgatcacact
gggcagcttattttcgctggtgatgcccagggttacatatatactgttagtgtgaattca
catacagggtcactctctagaactcacaagaacaagagcagtaagagcaaatctcctatt
acaacaatccagtatcgcaccttttctctggtagcacgttgtccagtacttctttcttgt
gctcaagatggatacctgtctttcttcagtattgcaacagatgctaaaggatacttgact
ctcatatcttctttaaaactggcctcacgggtgcagactatccgtgcttccttctgtcca
tttctttcccttgagaaaggagagttcatagttactggcagcgaggatgcaaatgtttac
ttctatgatttggcacgcccaaagaactcgtgtgtgaataaactacagggacatggctct
ccagtaattggagttgcctggaaccatggggaaaatttgctggcctcatctgattcagat
ggtacagttattgtatggaagcgggcgaaaactaattag

DBGET integrated database retrieval system