Panicum virgatum (switchgrass): 120674269
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Entry
120674269 CDS
T07260
Name
(RefSeq) endoglucanase 2-like
KO
K01179
endoglucanase [EC:
3.2.1.4
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00500
Starch and sucrose metabolism
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
120674269
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.4 cellulase
120674269
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Motif
Pfam:
Glyco_hydro_9
CBM49
DUF3787
Motif
Other DBs
NCBI-GeneID:
120674269
NCBI-ProteinID:
XP_039811355
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Position
5N:2002974..2006202
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AA seq
640 aa
AA seq
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MAGGRGGGGSCGVAGSLALLVLAAAAQVACAAAAGHDYGTALSKSILYFEAQRSGRLPGG
QRVAWRANSGLLDGKANGVDLVGGYYDAGDNVKFGLPMAFTVTMMSWSVLEYGDQMAAAG
ELGHALEAVRWGTDYFVKAHPEADVLYAEVGDGDSDHDCWQRPEDMTTSRQAYRLDPQHP
GSELAGETAAAMAAASLVFRTSDPGYANQLLQHSKQLFDFADKYRGRYDSSITVARNYYA
SSSGYGDELLWAAAWLYQTSGDRRYLDYLANNADALGGTGWSINQFGWDVKYPGVQVLAA
MVLLRGKAGGGPHADVLRRYKQKADLFACSCLGRAGASNVRRTPGGMIYHQSWNNVQFVT
SASFLLAAYGDHLAAARQAAQCPSGAAAQPAELLAFARSQVDYILGSNPRATSYMVGYGA
TYPQQAHHRGASIVSIKADPAFVSCQGGYSSWYHRRGSNPNLLVGATVGGPDEYDNFADE
RDNYEQTEATTYNNAPMMGVLARLAAGHAGGRRFGHSLADEVSASSLKSDNQTSRPPPSL
AAEHASPIEIEQNATASWTERGKTYHRYAVTVTNRSPKTVHELHIGISRLYGKVWGVDKA
RYGYVLPSWLPALPAGKSAAFVYVQAAPPADVWVTGYKLL
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atggccgggggacgaggaggaggaggatcgtgcggcgtggccggcagcctcgccctgctc
gtgctcgccgccgcggcgcaggtggcgtgcgcggccgccgccgggcacgactacggcacg
gcgctgagcaagagcatcctctacttcgaggcgcagcgctccgggcggctccccggcggc
cagcgggtcgcctggcgcgccaactccggcctgctcgacggcaaggccaacggggtggac
ctggtgggcggctactacgacgccggcgacaacgtcaagttcggcctgccgatggcgttc
acggtgaccatgatgtcgtggagcgtgctcgagtacggcgaccagatggcggcggccggc
gagctgggccacgccctggaggccgtcaggtggggcaccgactacttcgtcaaggcgcac
ccggaggccgacgtgctctacgcagaggtcggcgacggtgactcggaccacgactgctgg
cagcggccggaggacatgacgacgagccggcaggcgtaccggctggacccccagcacccg
gggtccgagctcgccggggaaaccgccgcagcaatggcggcggcgtcgctcgtcttccgc
acctccgaccccggctacgccaaccagctcctccaacactccaagcagctgtttgatttc
gctgacaagtaccggggccggtacgacagcagcatcaccgtcgcgcgcaactactatgcc
tcctccagcggatacggggacgagctgctgtgggcggcggcgtggctgtaccagacgtcc
ggcgaccggcggtacttggactacctggccaacaacgccgacgcgctgggcggcacgggc
tggtccatcaaccagttcggctgggacgtcaagtaccccggcgtgcaggtcctggccgcc
atggtgctcctgcggggcaaggccggcggcggcccgcacgccgacgtgctgcggcggtac
aagcagaaggcggacctcttcgcgtgctcctgcctcggcagggccggcgccagcaacgtc
cggcggacgcccggcggcatgatctaccaccagagctggaacaacgtgcagttcgtcacc
agcgcgtcgttcctgctggcggcgtacggcgaccacctcgccgcggcgcggcaggccgca
cagtgcccgtccggggcggcggcgcagccggcggagctcctcgcgttcgccaggtcgcag
gtggactacatcctggggagcaacccgagggcgacgagctacatggtcggctacggcgcg
acgtacccgcagcaggcgcaccaccgcggcgcgtccatcgtgtccatcaaggccgacccc
gccttcgtgagctgccagggcggctacagcagctggtaccaccgccgcggcagcaacccg
aacctgctcgtcggcgccaccgtcggcggcccggacgagtacgacaacttcgccgacgag
agggacaactacgagcagacggaggccaccacctacaacaacgcgccgatgatgggcgtg
ctcgctcgactggccgccggccacgccggcggccgccggtttggtcactcgctcgccgat
gaggtttctgcatcatccctcaagagcgacaaccagacctcacggccacctccatctttg
gctgctgaacacgcctcgcccatcgagatcgagcagaacgcgacggcgtcgtggacggag
aggggcaagacgtaccaccggtacgcggtgacggtgaccaaccggtcccccaagacggtc
cacgagctccacatcggcatctccaggctctacggcaaggtgtggggggtcgacaaggcg
cgctacggctacgtgctcccgagctggctgccggcgctgcccgccggcaagagcgccgcg
ttcgtgtacgtccaggccgcgccgccggcggacgtctgggtcaccggctacaagctcctc
tag
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